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Report for CCDS10650.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10650.1 Public Homo sapiens 16 SPN 24 110 108 CCDS HistoryNCBI Gene:6693Re-query CCDS DB by CCDS ID:10650.1Re-query CCDS DB by GeneID:6693See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10650.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360121.4 ENSP00000353238.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360121.4Link to Ensembl Protein Viewer:ENSP00000353238.3Re-query CCDS DB by Nucleotide ID:ENST00000360121Re-query CCDS DB by Protein ID:ENSP00000353238
Original member Current member EBI ENST00000395389.2 ENSP00000378787.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395389.2Link to Ensembl Protein Viewer:ENSP00000378787.2Re-query CCDS DB by Nucleotide ID:ENST00000395389Re-query CCDS DB by Protein ID:ENSP00000378787
Original member Current member EBI ENST00000563039.2 ENSP00000455266.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563039.2Link to Ensembl Protein Viewer:ENSP00000455266.1Re-query CCDS DB by Nucleotide ID:ENST00000563039Re-query CCDS DB by Protein ID:ENSP00000455266
Original member Current member EBI ENST00000652691.1 ENSP00000498852.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000652691.1Link to Ensembl Protein Viewer:ENSP00000498852.1Re-query CCDS DB by Nucleotide ID:ENST00000652691Re-query CCDS DB by Protein ID:ENSP00000498852
Original member Current member NCBI NM_001030288.4 NP_001025459.1 Accepted alive Link to Nucleotide Sequence:NM_001030288.4Link to Protein Sequence:NP_001025459.1Re-query CCDS DB by Nucleotide ID:NM_001030288Re-query CCDS DB by Protein ID:NP_001025459Link to BLAST:NP_001025459.1
Original member Current member NCBI NM_003123.6 NP_003114.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003123.6Link to Protein Sequence:NP_003114.1Re-query CCDS DB by Nucleotide ID:NM_003123Re-query CCDS DB by Protein ID:NP_003114Link to BLAST:NP_003114.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025459.1 400 P16150 400 100% 0 0
NP_003114.1 400 P16150 400 100% 0 0

Chromosomal Locations for CCDS 10650.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 29663729 29664931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1203 nt):
ATGGCCACGCTTCTCCTTCTCCTTGGGGTGCTGGTGGTAAGCCCAGACGCTCTGGGGAGCACAACAGCAG
TGCAGACACCCACCTCCGGAGAGCCTTTGGTCTCTACTAGCGAGCCCCTGAGCTCAAAGATGTACACCAC
TTCAATAACAAGTGACCCTAAGGCCGACAGCACTGGGGACCAGACCTCAGCCCTACCTCCCTCAACTTCC
ATCAATGAGGGATCCCCTCTTTGGACTTCCATTGGTGCCAGCACTGGTTCCCCTTTACCTGAGCCAACAA
CCTACCAGGAAGTTTCCATCAAGATGTCATCAGTGCCCCAGGAAACCCCTCATGCAACCAGTCATCCTGC
TGTTCCCATAACAGCAAACTCTCTAGGATCCCACACCGTGACAGGTGGAACCATAACAACGAACTCTCCA
GAAACCTCCAGTAGGACCAGTGGAGCCCCTGTTACCACGGCAGCTAGCTCTCTGGAGACCTCCAGAGGCA
CCTCTGGACCCCCTCTTACCATGGCAACTGTCTCTCTGGAGACTTCCAAAGGCACCTCTGGACCCCCTGT
TACCATGGCAACTGACTCTCTGGAGACCTCCACTGGGACCACTGGACCCCCTGTTACCATGACAACTGGC
TCTCTGGAGCCCTCCAGCGGGGCCAGTGGACCCCAGGTCTCTAGCGTAAAACTATCTACAATGATGTCTC
CAACGACCTCCACCAACGCAAGCACTGTGCCCTTCCGGAACCCAGATGAGAACTCACGAGGCATGCTGCC
AGTGGCTGTGCTTGTGGCCCTGCTGGCGGTCATAGTCCTCGTGGCTCTGCTCCTGCTGTGGCGCCGGCGG
CAGAAGCGGCGGACTGGGGCCCTCGTGCTGAGCAGAGGCGGCAAGCGTAACGGGGTGGTGGACGCCTGGG
CTGGGCCAGCCCAGGTCCCTGAGGAGGGGGCCGTGACAGTGACCGTGGGAGGGTCCGGGGGCGACAAGGG
CTCTGGGTTCCCCGATGGGGAGGGGTCTAGCCGTCGGCCCACGCTCACCACTTTCTTTGGCAGACGGAAG
TCTCGCCAGGGCTCCCTGGCGATGGAGGAGCTGAAGTCTGGGTCAGGCCCCAGCCTCAAAGGGGAGGAGG
AGCCACTGGTGGCCAGTGAGGATGGGGCTGTGGACGCCCCAGCTCCTGATGAGCCCGAAGGGGGAGACGG
GGCTGCCCCTTAA

Translation (400 aa):
MATLLLLLGVLVVSPDALGSTTAVQTPTSGEPLVSTSEPLSSKMYTTSITSDPKADSTGDQTSALPPSTS
INEGSPLWTSIGASTGSPLPEPTTYQEVSIKMSSVPQETPHATSHPAVPITANSLGSHTVTGGTITTNSP
ETSSRTSGAPVTTAASSLETSRGTSGPPLTMATVSLETSKGTSGPPVTMATDSLETSTGTTGPPVTMTTG
SLEPSSGASGPQVSSVKLSTMMSPTTSTNASTVPFRNPDENSRGMLPVAVLVALLAVIVLVALLLLWRRR
QKRRTGALVLSRGGKRNGVVDAWAGPAQVPEEGAVTVTVGGSGGDKGSGFPDGEGSSRRPTLTTFFGRRK
SRQGSLAMEELKSGSGPSLKGEEEPLVASEDGAVDAPAPDEPEGGDGAAP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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