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Report for CCDS58679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58679.1 Public Homo sapiens 19 DNAAF3 24 110 108 CCDS HistoryNCBI Gene:352909Re-query CCDS DB by CCDS ID:58679.1Re-query CCDS DB by GeneID:352909See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 58679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000455045.5 ENSP00000394343.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455045.5Link to Ensembl Protein Viewer:ENSP00000394343.1Re-query CCDS DB by Nucleotide ID:ENST00000455045Re-query CCDS DB by Protein ID:ENSP00000394343
Original member Current member NCBI NM_001256716.2 NP_001243645.1 Accepted alive Link to Nucleotide Sequence:NM_001256716.2Link to Protein Sequence:NP_001243645.1Re-query CCDS DB by Nucleotide ID:NM_001256716Re-query CCDS DB by Protein ID:NP_001243645Link to BLAST:NP_001243645.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243645.1 487 Q8N9W5-7 487 100% 0 0

Chromosomal Locations for CCDS 58679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55159062 55159449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55159533 55159607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55159899 55160013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55160640 55160775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161065 55161187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161293 55161418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55161643 55161825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55162133 55162290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55165370 55165463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55165782 55165847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1464 nt):
ATGAAGATGAGAGCCCAGATTCCCGAGTCCTTGAGGGAGGAAGGGATTGAAATTCTAAAACCTCAGTTCT
TTGTGCTGGAGAATAATCTGGAAGCTGTGGCCCGACACATGCTGATCTTCAGCCTAGCCCTGGAGGAACC
GGAGAAGATGGGGCTGCAAGAGCGAAGCGAGACCTTCCTGGAAGTGTGGGGGAACGCGCTGCTGCGCCCG
CCAGTGGCCGCCTTCGTGCGTGCCCAGGCCGACCTGCTGGCGCACCTGGTCCCCGAGCCCGACCGCCTGG
AGGAACAGCTGCCCTGGCTCAGCCTCCGCGCCCTCAAGTTCCGCGAGCGGGATGCCCTGGAGGCCGTATT
CCGCTTCTGGGCTGGCGGCGAGAAAGGGCCCCAGGCGTTCCCCATGAGCCGCCTCTGGGACTCGCGCCTG
CGCCACTACCTGGGCTCCCGCTACGACGCCCGGCGCGGTGTCAGCGACTGGGACCTGCGCATGAAGCTGC
ATGACCGCGGGGCTCAAGTCATTCACCCCCAGGAGTTCCGACGCTGGCGGGACACAGGCGTCGCCTTTGA
ACTCAGGGACTCCAGCGCCTATCATGTGCCCAACCGGACCCTGGCGTCCGGTCGCCTCCTGAGCTACCGT
GGGGAGCGCGTGGCAGCGCGCGGGTACTGGGGGGACATCGCCACGGGGCCCTTCGTGGCCTTCGGCATCG
AAGCGGACGACGAGAGCCTCCTGCGGACGAGCAACGGCCAGCCAGTCAAGACGGCCGGGGAGATCACTCA
ACACAACGTGACGGAGCTGCTCCGCGACGTGGCCGCCTGGGGGCGCGCGAGAGCCACCGGGGGGGACCTG
GAGGAGCAGCAGCACGCGGAGGGAAGCCCGGAGCCAGGGACTCCAGCAGCCCCGACCCCGGAATCTTTCA
CCGTCCACTTCCTGCCGCTCAATTCTGCTCAGACTCTCCACCACAAGAGCTGCTACAACGGCCGATTCCA
GCTCCTCTATGTGGCCTGTGGTATGGTCCATCTTCTCATCCCTGAGCTTGGGGCCTGTGTGGCACCCGGA
GGGAACTTGATTGTGGAATTAGCCCGGTACCTGGTGGACGTGCGGCAGGAGCAGCTGCAGGGATTCAACA
CCCGGGTCAGGGAGCTAGCTCAGGCAGCTGGATTTGCTCCACAGACCGGGGCCAGGCCTTCAGAGACCTT
CGCACGTTTCTGCAAGTCCCAGGAATCAGCTCTGGGCAACACTGTCCCAGCTGTGGAACCCGGAACTCCG
CCCCTTGACATCCTGGCCCAGCCTCTTGAAGCCAGCAACCCAGCCCTTGAGGGCCTGACCCAGCCTCTGC
AGGGTGGGACCCCACACTGTGAGCCCTGCCAGCTGCCCTCTGAGTCTCCAGGTTCACTCTCAGAGGTTCT
GGCTCAGCCTCAGGGGGCCTTGGCTCCGCCCAACTGTGAGTCAGACTCCAAAACTGGAGTCTGA

Translation (487 aa):
MKMRAQIPESLREEGIEILKPQFFVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLEVWGNALLRP
PVAAFVRAQADLLAHLVPEPDRLEEQLPWLSLRALKFRERDALEAVFRFWAGGEKGPQAFPMSRLWDSRL
RHYLGSRYDARRGVSDWDLRMKLHDRGAQVIHPQEFRRWRDTGVAFELRDSSAYHVPNRTLASGRLLSYR
GERVAARGYWGDIATGPFVAFGIEADDESLLRTSNGQPVKTAGEITQHNVTELLRDVAAWGRARATGGDL
EEQQHAEGSPEPGTPAAPTPESFTVHFLPLNSAQTLHHKSCYNGRFQLLYVACGMVHLLIPELGACVAPG
GNLIVELARYLVDVRQEQLQGFNTRVRELAQAAGFAPQTGARPSETFARFCKSQESALGNTVPAVEPGTP
PLDILAQPLEASNPALEGLTQPLQGGTPHCEPCQLPSESPGSLSEVLAQPQGALAPPNCESDSKTGV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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