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Report for CCDS3199.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3199.2 Public Homo sapiens 3 ZBBX 24 110 108 CCDS HistoryNCBI Gene:79740Re-query CCDS DB by CCDS ID:3199.2Re-query CCDS DB by GeneID:79740See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3199.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392766.6 ENSP00000376519.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392766.6Link to Ensembl Protein Viewer:ENSP00000376519.2Re-query CCDS DB by Nucleotide ID:ENST00000392766Re-query CCDS DB by Protein ID:ENSP00000376519
Original member Current member EBI ENST00000455345.7 ENSP00000390232.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455345.7Link to Ensembl Protein Viewer:ENSP00000390232.3Re-query CCDS DB by Nucleotide ID:ENST00000455345Re-query CCDS DB by Protein ID:ENSP00000390232
Original member Current member NCBI NM_001377489.1 NP_001364418.1 Accepted alive Link to Nucleotide Sequence:NM_001377489.1Link to Protein Sequence:NP_001364418.1Re-query CCDS DB by Nucleotide ID:NM_001377489Re-query CCDS DB by Protein ID:NP_001364418Link to BLAST:NP_001364418.1
Original member Current member NCBI NM_024687.4 NP_078963.2 Accepted alive Link to Nucleotide Sequence:NM_024687.4Link to Protein Sequence:NP_078963.2Re-query CCDS DB by Nucleotide ID:NM_024687Re-query CCDS DB by Protein ID:NP_078963Link to BLAST:NP_078963.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364418.1 800 A8MT70-1 800 100% 0 0
NP_078963.2 800 A8MT70-1 800 100% 0 0

Chromosomal Locations for CCDS 3199.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 167240793 167240919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167242505 167242643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167282238 167282495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167298305 167298458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167305643 167305950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167313974 167314116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167315750 167315829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167317005 167317105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167317488 167317597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167322117 167322237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167327942 167328116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167333827 167333985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167350420 167350515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167359870 167359979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167360675 167360723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167365886 167365976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167368461 167368574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 167372834 167372901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2403 nt):
ATGAACAGAAAAGATTTTGTAGTTCTTCCATGGGGAAAACCTGGAAATTCTGTAAAGCTAAAATATAGAA
ATGCTCAAGAACTGCGAATGGAGAAAGTACAGTTAGAGTTTGAGAACCAAGAGATGGAGAAGAAACTGCA
AGAATTCCGATCCACAAGAAACAAAGAAAAGGAAGATAGAGAGTCAAGCGAGTATTACTGGAAATCTGGA
AAAGTGGGCAAATTGGTCAATCAATCATATATGATGTCACAAAATAAAGGAAATGTTGTTAAGTTTTCTG
CTGGAAAAGTGAAATTAAAATTGCTGAAGGAACAGATTCAAGAGCCAGTGAAACCAACAGTTAATTATAA
AATGGCAAATTCTTCAGAATGTGAAAAACCCAAGATAAATGGGAAAGTATGTGGACAGTGTGAGAACAAA
GCTGCTCTACTGGTATGCCTTGAATGTGGAGAAGATTATTGTTCAGGATGCTTTGCTAAAGTTCACCAGA
AAGGGGCACTAAAGCTCCACAGAACAACTCTTTTGCAGGCAAAATCTCAAATATTATTCAATGTATTGGA
TGTTGCCCATCAGTTTATAAAGGATGTTAATCCAGATGAACCCAAAGAGGAGAATAATTCTACAAAGGAA
ACCAGTAAAATTCAACATAAACCCAAATCTGTACTTCTCCAGAGGAGCAGCTCTGAGGTAGAAATTACAA
CGATGAAAAGAGCACAACGTACAAAACCAAGAAAGAGTCTGTTGTGTGAAGGGTCATTCGATGAAGAAGC
TTCTGCACAGTCCTTTCAGGAAGTGTTAAGTCAATGGAGAACCGGAAATCATGATGACAACAAGAAACAG
AATTTACATGCAGCAGTAAAAGACTCATTGGAAGAATGCGAAGTACAGACTAATCTGAAAATTTGGAGAG
AACCACTTAATATTGAACTTAAAGAAGACATTCTATCCTATATGGAAAAATTATGGCTTAAAAAACACAG
GAGAACTCCACAAGAGCAACTTTTTAAAATGCTACCAGATACGTTCCCACATCCACATGAAACCACTGGT
GATGCACAGTGTTCTCAAAATGAAAACGATGAAGATAGTGATGGTGAGGAGACCAAAGTACAACACACAG
CTCTTTTATTGCCAGTAGAAACATTAAACATAGAGAGACCTGAACCATCTCTAAAGATAGTCGAACTGGA
TGATACTTATGAAGAGGAATTTGAAGAAGCAGAAAATATTGTGCCTTACAAAGTTAAATTAGCTGATGCA
GACAGTCAACGAAGTTGTGCTTTTCATGATTGTCAGAAGAATAGCTTTCCATATGAAAATGGCATCCATC
AACATCATGTTTTCGATAAGGGAAAGAGAGACTTCTTAAATCTTTGTCTGAGAAACAGCTCTACTTATTA
TAAAGATAATTCAAAAGCAGAAACTTCAAACACAGATTTTGACAACATCGTGGATCCTGATGTGTATTCT
TCTGACATTGAAAAAATTGAGGAAAGCACCTCCTTTGAAAGAAATTTAAAGGAGAAAAATATAGGTTTAG
AAAGTAATCAAAAGTCTGATGATTCCTGTGTATCACTTGAAAGCAAGGACACTTTGCTAGGTAGAGATTT
AGAAAAAGCTCCCATTGAGGAGAAATTATCTCAAGACATCAAAGAATCCTTGGAATTGAGCAATCTGTAT
AAGAGGCCAAGCTTTGAAGAATCAAAAACTACAAAGTCATCACTGTTGTTACAAGAAATAGCCTGCAGAA
GTAAGCCTATAACAAAACAATATCAAGGACTTGAGAGATTCTTTATTTTTGATACAAATGAAAGACTCAA
CTTACTTCCTTCTCATCGTTTAGAATGCAACAATTCCAGTACTAGGATTACACTTGCAGGTCAGAAATCA
CAGAGACCTTCAACAGCAAATTTTCCACTTTCCAACTCTGTTAAAGAAAGCTCCAGTTGCCTTTCATCCT
CTCATCCTCGATCAAGAAGTGCAGCTGCTCAATCATCATCTAGAGCTGCTTCTGAAATTTCAGAAATTGA
ATATATTGATATTACTGACCAGAATGAGCTTTCCTTAGATGACACTACTGATCAACATACTTTAGACAAT
TTGGAAAAAGAATTACAAGTGCTGAGATCTCTTGCAGATACTTCAGAAAAGCTTTACAGCTTAACCTCAG
AAGAGTTCCCAGATTTCAGCAGCCAATCACTGAATATAAGTCAGATTTCCACAGATTTCCTTAAGACCTC
ACATGTGAGGGGTCCCTGTGGAGTTGAGGAATTGAGCTGTTCTGGAAGAGATACCAAAATTCAGTCTTTG
CTGTCACTTTCTGAGAGCAGTACAGATGAGGAGGAGGAAGATTTTCTCAACAAGCAACATGTCATCACAC
TACCGTGGTCAAAGAGTACTTAA

Translation (800 aa):
MNRKDFVVLPWGKPGNSVKLKYRNAQELRMEKVQLEFENQEMEKKLQEFRSTRNKEKEDRESSEYYWKSG
KVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKMANSSECEKPKINGKVCGQCENK
AALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPDEPKEENNSTKE
TSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQ
NLHAAVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHRRTPQEQLFKMLPDTFPHPHETTG
DAQCSQNENDEDSDGEETKVQHTALLLPVETLNIERPEPSLKIVELDDTYEEEFEEAENIVPYKVKLADA
DSQRSCAFHDCQKNSFPYENGIHQHHVFDKGKRDFLNLCLRNSSTYYKDNSKAETSNTDFDNIVDPDVYS
SDIEKIEESTSFERNLKEKNIGLESNQKSDDSCVSLESKDTLLGRDLEKAPIEEKLSQDIKESLELSNLY
KRPSFEESKTTKSSLLLQEIACRSKPITKQYQGLERFFIFDTNERLNLLPSHRLECNNSSTRITLAGQKS
QRPSTANFPLSNSVKESSSCLSSSHPRSRSAAAQSSSRAASEISEIEYIDITDQNELSLDDTTDQHTLDN
LEKELQVLRSLADTSEKLYSLTSEEFPDFSSQSLNISQISTDFLKTSHVRGPCGVEELSCSGRDTKIQSL
LSLSESSTDEEEEDFLNKQHVITLPWSKST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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