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Report for CCDS54911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54911.1 Public Homo sapiens 5 NDUFA2 24 110 108 CCDS HistoryNCBI Gene:4695Re-query CCDS DB by CCDS ID:54911.1Re-query CCDS DB by GeneID:4695See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54911.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000512088.1 ENSP00000427220.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000512088.1Link to Ensembl Protein Viewer:ENSP00000427220.1Re-query CCDS DB by Nucleotide ID:ENST00000512088Re-query CCDS DB by Protein ID:ENSP00000427220
Original member Current member NCBI NM_001185012.2 NP_001171941.1 Accepted alive Link to Nucleotide Sequence:NM_001185012.2Link to Protein Sequence:NP_001171941.1Re-query CCDS DB by Nucleotide ID:NM_001185012Re-query CCDS DB by Protein ID:NP_001171941Link to BLAST:NP_001171941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171941.1 76 O43678-2 76 100% 0 0

Chromosomal Locations for CCDS 54911.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 140645703 140645725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 140647256 140647362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 140647483 140647583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (231 nt):
ATGGCGGCGGCCGCAGCAAGTCGAGGAGTCGGGGCAAAGCTGGGCCTGCGTGAGATTCGCATCCACTTAT
GTCAGCGCTCGCCCGGCAGCCAGGGCGTCAGGGACTTCATTGAGAAACGCTACGTGGAGCTGAAGAAGGC
GAATCCCGACCTACCCATCCTAATCCGCGAATGCTCCGATGTGCAGCCCAAGCTCTGGGCCCGCTACGCC
TCCAGGGTGCAGAATAGTTAA

Translation (76 aa):
MAAAAASRGVGAKLGLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA
SRVQNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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