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Report for CCDS10530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10530.1 Public Homo sapiens 16 EEF2KMT 24 110 108 CCDS HistoryNCBI Gene:196483Re-query CCDS DB by CCDS ID:10530.1Re-query CCDS DB by GeneID:196483See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10530.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458008.8 ENSP00000389710.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458008.8Link to Ensembl Protein Viewer:ENSP00000389710.3Re-query CCDS DB by Nucleotide ID:ENST00000458008Re-query CCDS DB by Protein ID:ENSP00000389710
Original member Current member NCBI NM_201598.4 NP_963892.1 Accepted alive Link to Nucleotide Sequence:NM_201598.4Link to Protein Sequence:NP_963892.1Re-query CCDS DB by Nucleotide ID:NM_201598Re-query CCDS DB by Protein ID:NP_963892Link to BLAST:NP_963892.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_963892.1 296 Q96G04-2 296 100% 0 0

Chromosomal Locations for CCDS 10530.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 5085632 5085732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5089107 5089256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5090084 5090349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5090432 5090565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5093484 5093564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5095452 5095514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 5097644 5097739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGGCGCCCGAGGAGAACGCGGGGACCGAACTCTTGCTGCAGAGTTTCGAGCGCCGCTTCCTGGCGGCAC
GCACACTGCGCTCCTTCCCCTGGCAGAGCTTAGAAGCAAAGTTAAGAGACTCATCAGATTCTGAGCTGCT
GCGGGATATTTTGCACAAGACTGTGAAGCATCCTGTGTGTGTGAAGCACCCGCCGTCCGTCAAATATGCC
CGGTGCTTTCTCTCAGAACTCATCAAAAAGCCCTCGGGAGGCTCGGTCACACTCTCCGAGAGCACGGCCA
TCATCTCCTACGGTACCACAGGCCTGGTCACATGGGACGCCGCCCTCTACCTTGCAGAATGGGCCATCGA
GAACCCGGCAGTCTTCACTAACAGGACTGTCCTAGAGCTTGGCAGTGGTGCTGGCCTCACAGGCCTGGCC
ATCTGCAAGATGTGCCGCCCCCGGGCATACATCTTCAGCGACTGTCACAGCCGGGTCCTTGAGCAGCTCC
GAGGGAATGTCCTTCTCAATGGCCTCTCATTAGAGGCAGACATCACTGCCAAGTTAGACAGCCCCAGGGT
GACAGTGGCCCAGCTGGACTGGGACGTCGCGACGGTCCATCAGCTCTCTGCCTTCCAGCCAGATGTTGTC
ATTGCAGCAGATGTGCTGTATTGCCCAGAAGCCATCATGTCGCTGGTCGGGGTCCTGCGGAGGCTGGCTG
CCTGCCGGGAGCACCAGCGGGCTCCTGAGGTCTACGTGGCCTTTACCGTCCGCAACCCAGAGACGTGCCA
GCTGTTCACCACCGAGCTAGGCCGGGCCGGGATCAGATGGGAAGTGGAACCTCGTCATGAGCAGAAACTG
TTTCCCTACGAAGAGCACTTGGAGATGGCAATGCTGAATCTCACCCTGTAG

Translation (296 aa):
MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVCVKHPPSVKYA
RCFLSELIKKPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA
ICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQPDVV
IAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKL
FPYEEHLEMAMLNLTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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