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Report for CCDS41675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41675.1 Public Homo sapiens 11 PELI3 24 110 108 CCDS HistoryNCBI Gene:246330Re-query CCDS DB by CCDS ID:41675.1Re-query CCDS DB by GeneID:246330See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41675.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349459.10 ENSP00000309848.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000349459.10Link to Ensembl Protein Viewer:ENSP00000309848.8Re-query CCDS DB by Nucleotide ID:ENST00000349459Re-query CCDS DB by Protein ID:ENSP00000309848
Original member Current member NCBI NM_001098510.2 NP_001091980.1 Accepted alive Link to Nucleotide Sequence:NM_001098510.2Link to Protein Sequence:NP_001091980.1Re-query CCDS DB by Nucleotide ID:NM_001098510Re-query CCDS DB by Protein ID:NP_001091980Link to BLAST:NP_001091980.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091980.1 445 Q8N2H9-2 445 100% 0 0

Chromosomal Locations for CCDS 41675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66468129 66468280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66471242 66471371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66472369 66472470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66473241 66473435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66473737 66473925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66475598 66476167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGGTGCTGGAAGGAAACCCTGAAGTGGGGTCCCCCCGAACCTCAGACCTCCAGCACCGGGGGAACAAGG
GCTCTTGCGTTCTCTCCTCTCCCGGTGAAGATGCGCAGCCAGGCGAGGAGCCCATCAAGTATGGTGAACT
CATCGTCCTGGGCTACAATGGTTGTCTGGCAAGTGGGGACAAGGGCCGCCGGCGAAGCCGCCTGGCACTG
AGCCGCCGGTCGCACGCCAACGGGGTGAAGCCAGACGTCATGCACCACATCTCCACGCCGCTCGTCTCCA
AGGCACTGAGTAACCGTGGTCAGCACAGCATCTCGTATACACTGTCCCGGAGCCACTCGGTCATAGTGGA
GTATACACATGATAGCGACACAGACATGTTCCAGATTGGCCGCTCCACAGAGAACATGATTGACTTCGTG
GTAACAGACACGTCCCCTGGAGGAGGGGCTGCCGAGGGCCCTTCTGCCCAGAGCACCATCTCCCGCTATG
CCTGCCGCATCCTCTGTGACCGCCGGCCACCCTATACTGCCCGCATCTATGCCGCTGGCTTCGATGCCTC
TAGCAACATCTTCCTTGGAGAGCGAGCGGCCAAATGGCGGACCCCAGATGGCCTGATGGATGGACTGACC
ACCAATGGAGTCCTGGTGATGCACCCGGCAGGCGGCTTCTCCGAGGACTCAGCCCCGGGTGTCTGGCGGG
AGATCTCGGTCTGTGGGAATGTGTACACATTGCGGGACAGCCGCTCAGCCCAGCAGCGGGGCAAGCTGGT
GGAAAACGAGTCCAACGTGCTGCAGGACGGCTCTCTCATCGACCTGTGTGGGGCCACACTGCTGTGGCGC
ACACCGGCGGGGCTGCTGCGGGCTCCCACACTGAAGCAACTGGAGGCCCAGCGGCAGGAGGCAAATGCAG
CGCGGCCCCAGTGCCCCGTGGGCCTCAGCACTCTGGCCTTCCCCAGCCCAGCCCGTGGCCGCACAGCGCC
CGACAAACAGCAGCCCTGGGTCTACGTCCGCTGCGGGCACGTCCATGGCTACCACGGCTGGGGCTGCCGG
CGGGAGCGGGGCCCCCAGGAGCGCGAATGTCCTCTCTGCCGCCTTGTGGGGCCTTATGTGCCTCTATGGC
TTGGCCAGGAGGCCGGCCTCTGCCTGGACCCTGGGCCGCCTAGCCATGCCTTTGCACCTTGCGGCCACGT
CTGCTCTGAGAAGACTGCCCGCTACTGGGCCCAGACACCACTGCCCCACGGCACCCATGCTTTCCATGCC
GCCTGCCCCTTTTGCGGGGCCTGGCTTACCGGCGAGCATGGCTGCGTCCGCCTCATTTTCCAGGGCCCGC
TGGATTAG

Translation (445 aa):
MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGYNGCLASGDKGRRRSRLAL
SRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFV
VTDTSPGGGAAEGPSAQSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLT
TNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWR
TPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCR
RERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHA
ACPFCGAWLTGEHGCVRLIFQGPLD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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