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Report for CCDS10815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10815.1 Public Homo sapiens 16 CMTM3 24 110 108 CCDS HistoryNCBI Gene:123920Re-query CCDS DB by CCDS ID:10815.1Re-query CCDS DB by GeneID:123920See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10815.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361909.8 ENSP00000354579.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361909.8Link to Ensembl Protein Viewer:ENSP00000354579.4Re-query CCDS DB by Nucleotide ID:ENST00000361909Re-query CCDS DB by Protein ID:ENSP00000354579
Original member Current member EBI ENST00000424011.6 ENSP00000400482.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424011.6Link to Ensembl Protein Viewer:ENSP00000400482.2Re-query CCDS DB by Nucleotide ID:ENST00000424011Re-query CCDS DB by Protein ID:ENSP00000400482
Original member Current member EBI ENST00000562707.5 ENSP00000455758.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000562707.5Link to Ensembl Protein Viewer:ENSP00000455758.1Re-query CCDS DB by Nucleotide ID:ENST00000562707Re-query CCDS DB by Protein ID:ENSP00000455758
Original member Current member EBI ENST00000567572.6 ENSP00000455851.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000567572.6Link to Ensembl Protein Viewer:ENSP00000455851.1Re-query CCDS DB by Nucleotide ID:ENST00000567572Re-query CCDS DB by Protein ID:ENSP00000455851
Original member Current member NCBI NM_001363918.2 NP_001350847.1 Accepted alive Link to Nucleotide Sequence:NM_001363918.2Link to Protein Sequence:NP_001350847.1Re-query CCDS DB by Nucleotide ID:NM_001363918Re-query CCDS DB by Protein ID:NP_001350847Link to BLAST:NP_001350847.1
Original member Current member NCBI NM_001363923.2 NP_001350852.1 Accepted alive Link to Nucleotide Sequence:NM_001363923.2Link to Protein Sequence:NP_001350852.1Re-query CCDS DB by Nucleotide ID:NM_001363923Re-query CCDS DB by Protein ID:NP_001350852Link to BLAST:NP_001350852.1
Original member Current member NCBI NM_144601.5 NP_653202.1 Accepted alive Link to Nucleotide Sequence:NM_144601.5Link to Protein Sequence:NP_653202.1Re-query CCDS DB by Nucleotide ID:NM_144601Re-query CCDS DB by Protein ID:NP_653202Link to BLAST:NP_653202.1
Original member Current member NCBI NM_181553.4 NP_853531.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181553.4Link to Protein Sequence:NP_853531.1Re-query CCDS DB by Nucleotide ID:NM_181553Re-query CCDS DB by Protein ID:NP_853531Link to BLAST:NP_853531.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350847.1 182 Q96MX0-1 182 100% 0 0
NP_001350852.1 182 Q96MX0-1 182 100% 0 0
NP_653202.1 182 Q96MX0-1 182 100% 0 0
NP_853531.1 182 Q96MX0-1 182 100% 0 0

Chromosomal Locations for CCDS 10815.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66604806 66604952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66608309 66608464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66609435 66609530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66609883 66610003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 66612609 66612637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGTGGCCCCCAGACCCCGACCCCGACCCGGACCCCGAGCCTGCCGGCGGCTCCCGTCCCGGCCCCGCGG
TCCCCGGGCTCCGCGCCCTGCTGCCGGCGCGGGCTTTCCTCTGCTCTCTCAAAGGCCGCCTCCTGCTGGC
CGAGTCGGGTCTCTCATTCATCACTTTTATCTGCTATGTGGCGTCCTCAGCATCTGCCTTCCTCACAGCG
CCTCTGCTGGAGTTCCTGCTGGCCTTGTACTTCCTCTTTGCTGATGCCATGCAGCTGAATGACAAGTGGC
AGGGCTTGTGCTGGCCCATGATGGACTTCCTGCGCTGTGTCACCGCGGCCCTCATCTACTTTGCTATCTC
CATCACGGCCATCGCCAAGTACTCGGATGGGGCTTCCAAAGCCGCTGGGGTGTTTGGCTTCTTTGCTACC
ATCGTGTTTGCAACTGATTTCTACCTGATCTTTAACGACGTGGCCAAATTCCTCAAACAAGGGGACTCTG
CAGATGAGACCACAGCCCACAAGACAGAAGAAGAGAATTCCGACTCGGACTCTGACTGA

Translation (182 aa):
MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYVASSASAFLTA
PLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFAT
IVFATDFYLIFNDVAKFLKQGDSADETTAHKTEEENSDSDSD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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