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Report for CCDS66253.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66253.1 Public Homo sapiens 11 GRAMD1B 24 110 108 CCDS HistoryNCBI Gene:57476Re-query CCDS DB by CCDS ID:66253.1Re-query CCDS DB by GeneID:57476See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66253.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000456860.6 ENSP00000402457.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456860.6Link to Ensembl Protein Viewer:ENSP00000402457.2Re-query CCDS DB by Nucleotide ID:ENST00000456860Re-query CCDS DB by Protein ID:ENSP00000402457
Original member Current member NCBI NM_001286563.3 NP_001273492.1 Accepted alive Link to Nucleotide Sequence:NM_001286563.3Link to Protein Sequence:NP_001273492.1Re-query CCDS DB by Nucleotide ID:NM_001286563Re-query CCDS DB by Protein ID:NP_001273492Link to BLAST:NP_001273492.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273492.1 745 Q3KR37-4 745 100% 0 0

Chromosomal Locations for CCDS 66253.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123526149 123526171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123577367 123577577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123578410 123578430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123584312 123584332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123594082 123594166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123594735 123594838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123595942 123596037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123600468 123600548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123603426 123603541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123605322 123605478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123606609 123606798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123608659 123608802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123609795 123609913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123610196 123610338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123612761 123612864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123613455 123613658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123614745 123614835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123618345 123618356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123618693 123618800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123619107 123619224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123622506 123622595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGAAAGGATTCAAGCTCTCCTGCACTGCCAGTAACTCCAACCGCAGCACGCCGGCCTGCTCGCCCATCC
TCCGGAAGCGGTCTCGCTCGCCAACCCCGCAGAACCAGGACGGAGACACCATGGTGGAGAAGGGCTCAGA
TCACTCCTCGGACAAGTCCCCGTCCACACCGGAGCAGGGCGTGCAGCGCAGCTGCTCCTCCCAGTCCGGC
CGGAGCGGCGGCAAGAATTCCAAGTCTCACAAGCGCCTCTCAAAAAAAAGCCAGAGTTGGTATAATGTGT
TAAGCCCCACCTACAAGCAGAGAAATGAAGACTTCAGAAAGCTCTTTAAGCAGCTTCCAGACACGGAGCG
CCTCATTGTTGATTACTCATGTGCACTCCAAAGAGACATTCTCCTTCAGGGCCGACTCTACCTCTCTGAA
AATTGGATCTGCTTCTACAGCAACATCTTCCGCTGGGAAACTCTGCTGACAGTCCGTTTGAAAGACATCT
GTTCCATGACTAAAGAAAAAACAGCTCGCCTCATTCCCAATGCCATCCAAGTTTGCACTGATTCAGAAAA
GCACTTCTTCACTTCGTTTGGGGCCCGGGATAGGACATATATGATGATGTTCCGGCTCTGGCAGAATGCT
CTCCTTGAAAAGCCTCTGTGTCCCAAGGAGCTCTGGCACTTTGTTCACCAGTGCTATGGGAACGAATTGG
GCCTGACCAGTGATGACGAGGACTACGTGCCCCCTGACGACGACTTCAACACAATGGGATACTGTGAAGA
GATCCCTGTGGAAGAGAATGAAGTGAATGACAGCTCATCCAAGAGCAGCATAGAGACCAAGCCAGATGCC
AGTCCACAGCTGCCCAAGAAATCCATCACCAACAGCACACTAACATCCACAGGGAGCAGTGAGGCCCCCG
TCTCGTTTGATGGGCTGCCCCTGGAGGAAGAGGCGCTGGAGGGAGACGGGTCCCTGGAAAAGGAGCTCGC
CATTGACAACATCATGGGGGAGAAGATTGAGATGATCGCTCCTGTGAACTCCCCTTCACTGGACTTCAAT
GACAATGAGGACATCCCCACTGAGCTCAGTGACTCTTCCGACACACACGATGAAGGAGAGGTCCAGGCCT
TCTATGAGGACCTGAGTGGCCGGCAGTACGTGAATGAAGTCTTCAACTTCAGCGTGGACAAGCTCTATGA
CCTCCTCTTCACCAACTCGCCCTTCCAGCGGGATTTCATGGAGCAGCGGCGCTTCTCTGATATCATCTTC
CATCCATGGAAAAAGGAGGAGAATGGAAACCAGAGCCGAGTGATTCTTTACACCATCACCCTTACCAACC
CTCTGGCTCCCAAAACTGCCACTGTCAGGGAGACACAGACCATGTACAAGGCGAGCCAGGAGAGTGAATG
TTACGTGATAGATGCCGAAGTCCTCACCCACGACGTGCCCTACCATGACTACTTCTACACAATCAATCGC
TACACGCTCACCCGTGTGGCTCGGAACAAGAGCCGACTCAGGGTCTCCACAGAGCTGCGCTATCGAAAAC
AGCCCTGGGGGTTAGTGAAAACGTTCATCGAGAAGAACTTCTGGAGTGGGCTGGAGGACTACTTCCGCCA
TTTAGAGAGCGAGCTGGCCAAAACGGAGAGCACTTATTTGGCTGAGATGCACAGACAATCTCCCAAAGAG
AAGGCCAGCAAGACTACAACGGTGCGGAGGAGGAAGCGTCCCCATGCCCACCTGCGAGTCCCTCACCTGG
AAGAGGTGATGAGCCCGGTCACCACGCCCACAGATGAGGATGTGGGCCACAGGATCAAACATGTGGCAGG
TTCCACACAGACGCGGCATATCCCGGAGGACACCCCCAACGGTTTCCACCTGCAGAGCGTGTCCAAGCTG
CTGCTGGTTATCAGCTGTGTGATCTGTTTCAGTCTGGTGCTGCTGGTCATCCTTAACATGATGCTCTTCT
ACAAACTCTGGATGTTGGAATACACCACGCAGACCCTCACTGCCTGGCAGGGTCTAAGGCTCCAAGAAAG
GTTACCCCAGTCTCAGACAGAATGGGCCCAGCTCTTAGAGTCCCAACAAAAGTACCACGATACTGAGCTC
CAAAAATGGAGGGAAATCATCAAATCCTCAGTGATGCTCCTTGACCAGATGAAGGACTCGCTCATCAACC
TTCAGAACGGCATCAGGTCCCGCGACTACACGTCGGAAAGTGAAGAAAAGAGGAATCGCTATCATTGA

Translation (745 aa):
MKGFKLSCTASNSNRSTPACSPILRKRSRSPTPQNQDGDTMVEKGSDHSSDKSPSTPEQGVQRSCSSQSG
RSGGKNSKSHKRLSKKSQSWYNVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSE
NWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNA
LLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPVEENEVNDSSSKSSIETKPDA
SPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEALEGDGSLEKELAIDNIMGEKIEMIAPVNSPSLDFN
DNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTNSPFQRDFMEQRRFSDIIF
HPWKKEENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVLTHDVPYHDYFYTINR
YTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELAKTESTYLAEMHRQSPKE
KASKTTTVRRRKRPHAHLRVPHLEEVMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDTPNGFHLQSVSKL
LLVISCVICFSLVLLVILNMMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTEL
QKWREIIKSSVMLLDQMKDSLINLQNGIRSRDYTSESEEKRNRYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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