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Report for CCDS13535.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13535.1 Public Homo sapiens 20 ZGPAT 24 110 108 CCDS HistoryNCBI Gene:84619Re-query CCDS DB by CCDS ID:13535.1Re-query CCDS DB by GeneID:84619See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13535.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355969.11 ENSP00000348242.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355969.11Link to Ensembl Protein Viewer:ENSP00000348242.6Re-query CCDS DB by Nucleotide ID:ENST00000355969Re-query CCDS DB by Protein ID:ENSP00000348242
Original member Current member EBI ENST00000369967.7 ENSP00000358984.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369967.7Link to Ensembl Protein Viewer:ENSP00000358984.3Re-query CCDS DB by Nucleotide ID:ENST00000369967Re-query CCDS DB by Protein ID:ENSP00000358984
Original member Current member EBI ENST00000448100.6 ENSP00000391176.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448100.6Link to Ensembl Protein Viewer:ENSP00000391176.1Re-query CCDS DB by Nucleotide ID:ENST00000448100Re-query CCDS DB by Protein ID:ENSP00000391176
Original member Current member NCBI NM_001083113.2 NP_001076582.1 Accepted alive Link to Nucleotide Sequence:NM_001083113.2Link to Protein Sequence:NP_001076582.1Re-query CCDS DB by Nucleotide ID:NM_001083113Re-query CCDS DB by Protein ID:NP_001076582Link to BLAST:NP_001076582.1
Original member Current member NCBI NM_001195653.2 NP_001182582.1 Accepted alive Link to Nucleotide Sequence:NM_001195653.2Link to Protein Sequence:NP_001182582.1Re-query CCDS DB by Nucleotide ID:NM_001195653Re-query CCDS DB by Protein ID:NP_001182582Link to BLAST:NP_001182582.1
Original member Current member NCBI NM_181485.3 NP_852150.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181485.3Link to Protein Sequence:NP_852150.2Re-query CCDS DB by Nucleotide ID:NM_181485Re-query CCDS DB by Protein ID:NP_852150Link to BLAST:NP_852150.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076582.1 511 Q8N5A5-2 511 100% 0 0
NP_001182582.1 511 Q8N5A5-2 511 100% 0 0
NP_852150.2 511 Q8N5A5-2 511 100% 0 0

Chromosomal Locations for CCDS 13535.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 63708581 63709164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63733219 63733352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63733587 63733739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63734705 63734824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63735159 63735564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63735781 63735919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGGACGAGGAGAGCCTGGAGTCGGCCTTGCAGACCTACCGTGCGCAGCTGCAGCAGGTGGAGCTGGCCT
TGGGCGCCGGCCTGGATTCGTCTGAGCAGGCTGACCTGCGCCAGCTGCAGGGGGACCTGAAGGAGCTCAT
CGAGCTCACCGAGGCCAGCCTGGTGTCTGTCAGGAAGAGCAGCTTGTTGGCCGCGCTGGACGAAGAGCGC
CCGGGCCGCCAGGAAGATGCTGAGTACCAGGCTTTCCGGGAGGCCATCACTGAGGCGGTGGAGGCACCAG
CAGCGGCCCGTGGGTCCGGATCAGAGACCGTTCCTAAAGCAGAGGCGGGGCCAGAATCTGCGGCAGGTGG
GCAGGAGGAGGAAGAGGGAGAGGACGAGGAAGAGCTGAGTGGGACAAAGGTGAGCGCGCCCTACTACAGC
TCCTGGGGCACTCTGGAGTATCACAACGCCATGGTGGTGGGAACGGAAGAGGCGGAGGATGGCTCGGCGG
GTGTCCGTGTGCTTTACCTGTACCCCACTCACAAGTCTCTGAAGCCGTGCCCGTTCTTCCTGGAGGGAAA
GTGCCGCTTTAAGGAGAACTGCAGGTTCTCCCATGGGCAGGTGGTCTCTCTGGATGAGCTGCGCCCCTTC
CAGGACCCAGACCTGAGCTCCCTGCAGGCCGGCTCTGCGTGTCTGGCCAAGCACCAGGATGGCCTCTGGC
ACGCAGCACGCATCACCGATGTGGACAACGGCTACTACACAGTCAAGTTTGACTCGCTGCTGCTGAGGGA
GGCCGTGGTGGAGGGGGACGGCATCCTGCCCCCACTGCGCACAGAGGCCACAGAGTCCGACTCAGACAGC
GACGGTACGGGTGACTCCAGCTATGCCAGAGTGGTGGGGTCAGATGCTGTGGACTCTGGGACCTGCAGCT
CTGCCTTTGCTGGCTGGGAGGTGCACACGCGAGGTATAGGCTCCAGACTCCTCACCAAGATGGGCTATGA
GTTTGGCAAGGGTTTGGGCCGACACGCGGAAGGCCGGGTGGAGCCCATCCATGCTGTGGTGTTGCCTCGA
GGGAAGTCGCTGGACCAGTGTGTGGAGACCCTGCAGAAGCAGACCAGGGTTGGCAAGGCTGGCACCAACA
AGCCCCCCAGGTGCCGGGGAAGAGGGGCCAGGCCTGGGGGCCGCCCAGCTCCTCGGAATGTGTTTGACTT
CCTCAATGAAAAGCTGCAAGGTCAGGCTCCTGGGGCCCTAGAAGCCGGGGCGGCCCCAGCGGGGAGGAGG
AGCAAGGACATGTACCATGCCAGCAAGAGTGCCAAGCGGGCCCTGAGCCTGCGGCTCTTCCAGACTGAGG
AGAAGATCGAGCGAACCCAGCGGGACATCAGGAGCATCCAGGAGGCTCTCGCCCGCAACGCTGGCCGGCA
TAGCGTGGCGTCAGCCCAGCTGCAGGAGAAGCTGGCAGGAGCCCAGCGCCAGCTGGGGCAGCTCCGGGCT
CAGGAAGCCGGCCTGCAGCAGGAGCAGAGGAAGGCAGACACCCACAAGAAGATGACTGAGTTCTAG

Translation (511 aa):
MDEESLESALQTYRAQLQQVELALGAGLDSSEQADLRQLQGDLKELIELTEASLVSVRKSSLLAALDEER
PGRQEDAEYQAFREAITEAVEAPAAARGSGSETVPKAEAGPESAAGGQEEEEGEDEEELSGTKVSAPYYS
SWGTLEYHNAMVVGTEEAEDGSAGVRVLYLYPTHKSLKPCPFFLEGKCRFKENCRFSHGQVVSLDELRPF
QDPDLSSLQAGSACLAKHQDGLWHAARITDVDNGYYTVKFDSLLLREAVVEGDGILPPLRTEATESDSDS
DGTGDSSYARVVGSDAVDSGTCSSAFAGWEVHTRGIGSRLLTKMGYEFGKGLGRHAEGRVEPIHAVVLPR
GKSLDQCVETLQKQTRVGKAGTNKPPRCRGRGARPGGRPAPRNVFDFLNEKLQGQAPGALEAGAAPAGRR
SKDMYHASKSAKRALSLRLFQTEEKIERTQRDIRSIQEALARNAGRHSVASAQLQEKLAGAQRQLGQLRA
QEAGLQQEQRKADTHKKMTEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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