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Report for CCDS54061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54061.1 Public Homo sapiens 17 WDR81 24 110 108 CCDS HistoryNCBI Gene:124997Re-query CCDS DB by CCDS ID:54061.1Re-query CCDS DB by GeneID:124997See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 54061.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437219.6 ENSP00000391074.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437219.6Link to Ensembl Protein Viewer:ENSP00000391074.2Re-query CCDS DB by Nucleotide ID:ENST00000437219Re-query CCDS DB by Protein ID:ENSP00000391074
Original member Current member NCBI NM_001163673.2 NP_001157145.1 Accepted alive Link to Nucleotide Sequence:NM_001163673.2Link to Protein Sequence:NP_001157145.1Re-query CCDS DB by Nucleotide ID:NM_001163673Re-query CCDS DB by Protein ID:NP_001157145Link to BLAST:NP_001157145.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157145.1 738 Q562E7-5 738 100% 0 0

Chromosomal Locations for CCDS 54061.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 1716576 1716633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1730380 1730487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1730755 1730945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1731068 1731258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1732325 1732490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1732666 1732831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1733527 1734216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1735572 1735717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1736039 1736218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1737365 1737685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGCTGGTCCGTGTAGTTCTCAGCCTGACACCGTCGTTCCCAGAACCCAGCGCGCTCTATACAGCCTGCA
AGATGGTCCGCTGGCTGTCTGCCAAGCTCGGCCCCACAGTGGCCTCTCGCCACGTGGCCCGGAACCTGCT
CCGCCTGCTGACGTCTTGTTATGTTGGACCCACTCGGCAGCAGTTCACAGTGAGCAGTGGCGAGAGCCCA
CCGCTGAGCGCCGGCAACATCTACCAGAAGAGGCCGGTCCTGGGCGACATCGTGTCAGGGCCTGTGCTCA
GCTGCCTCCTCCACATCGCCCGCCTGTATGGGGAGCCTGTCCTCACCTACCAGTACCTGCCCTACATCAG
CTACCTGGTGGCCCCAGGGAGTGCCTCAGGCCCCAGCCGACTGAACAGCCGTAAGGAGGCGGGGCTGCTG
GCCGCGGTGACGCTGACTCAGAAGATCATCGTGTACCTCTCAGACACCACACTCATGGACATCCTGCCCC
GGATCAGCCATGAGGTCCTGCTGCCCGTGCTCAGCTTCCTCACCTCCCTCGTCACGGGGTTCCCAAGTGG
GGCCCAGGCTCGGACCATCCTGTGTGTGAAAACCATCAGCCTCATCGCCCTCATCTGCCTGCGCATTGGA
CAGGAGATGGTCCAGCAGCACCTGAGCGAGCCCGTGGCCACCTTTTTCCAGGTCTTCTCTCAGCTGCATG
AGCTTCGGCAACAGGATCTGAAGCTGGACCCTGCGGGCCGTGGTGAGGGCCAGCTGCCACAGGTGGTCTT
CTCTGATGGGCAGCAGCGGCCCGTGGACCCCGCCCTGCTGGACGAGCTGCAGAAGGTGTTCACCCTGGAG
ATGGCATACACAATCTACGTGCCCTTCTCCTGCCTGTTGGGTGACATCATCCGGAAAATCATCCCCAACC
ACGAGCTGGTTGGGGAGCTGGCGGCGCTGTACTTGGAGAGCATCAGCCCCAGCAGTCGCAACCCTGCCAG
CGTGGAGCCCACCATGCCCGGCACCGGGCCCGAGTGGGACCCCCATGGTGGGGGCTGCCCTCAGGATGAC
GGCCACTCAGGGACCTTTGGGAGCGTCCTGGTGGGGAACCGCATTCAGATCCCCAATGACTCTCGGCCTG
AGAACCCCGGACCACTGGGCCCCATCTCGGGGGTGGGTGGCGGGGGCCTGGGCAGCGGGAGCGACGACAA
CGCCCTGAAGCAGGAGCTGCCGCGGAGCGTGCACGGGCTGAGCGGAAACTGGCTGGCGTACTGGCAGTAC
GAGATCGGCGTGAGCCAGCAGGATGCCCACTTTCACTTCCACCAGATCCGCCTGCAGAGCTTCCCGGGCC
ACTCGGGGGCCGTCAAGTGCGTGGCACCCCTAAGCAGCGAGGACTTCTTCCTGAGCGGCAGCAAGGATCG
TACCGTGCGCCTCTGGCCGCTGTACAACTACGGCGACGGGACCAGCGAGACGGCCCCACGCCTCGTCTAC
ACCCAGCACCGCAAGAGCGTCTTCTTCGTGGGCCAGCTTGAGGCCCCGCAGCACGTGGTGAGCTGTGACG
GGGCTGTGCACGTCTGGGACCCCTTCACAGGGAAGACCCTTCGCACAGTGGAGCCGCTGGACAGCCGGGT
GCCCCTGACTGCGGTGGCTGTCATGCCCGCCCCCCACACCAGCATCACCATGGCCAGCTCTGACTCTACC
CTGCGCTTTGTGGACTGCAGGAAGCCTGGTCTGCAGCACGAGTTCCGACTGGGCGGTGGGCTGAACCCTG
GGCTTGTCCGTGCCCTGGCCATCAGCCCCAGTGGCCGTAGTGTCGTGGCCGGCTTCTCCTCAGGCTTCAT
GGTGCTCCTGGACACCCGCACAGGCCTGGTTCTGCGAGGCTGGCCAGCCCACGAGGGGGACATTCTGCAG
ATCAAGGCGGTGGAGGGCAGCGTCCTGGTCAGCTCCTCCTCTGACCATTCCTTGACCGTCTGGAAGGAGC
TGGAGCAGAAGCCCACCCATCACTACAAGTCAGCATCCGACCCCATCCACACCTTTGACCTGTACGGCAG
CGAGGTGGTCACTGGCACCGTGTCCAACAAGATTGGCGTCTGCTCCCTGCTTGAGCCACCCTCGCAGGCC
ACCACGAAGCTCAGCTCTGAGAACTTCCGCGGCACGCTCACCAGCCTGGCCTTGCTGCCCACTAAACGCC
ACCTCCTGCTGGGCTCAGACAACGGGGTTATCCGCCTCCTGGCATAG

Translation (738 aa):
MLVRVVLSLTPSFPEPSALYTACKMVRWLSAKLGPTVASRHVARNLLRLLTSCYVGPTRQQFTVSSGESP
PLSAGNIYQKRPVLGDIVSGPVLSCLLHIARLYGEPVLTYQYLPYISYLVAPGSASGPSRLNSRKEAGLL
AAVTLTQKIIVYLSDTTLMDILPRISHEVLLPVLSFLTSLVTGFPSGAQARTILCVKTISLIALICLRIG
QEMVQQHLSEPVATFFQVFSQLHELRQQDLKLDPAGRGEGQLPQVVFSDGQQRPVDPALLDELQKVFTLE
MAYTIYVPFSCLLGDIIRKIIPNHELVGELAALYLESISPSSRNPASVEPTMPGTGPEWDPHGGGCPQDD
GHSGTFGSVLVGNRIQIPNDSRPENPGPLGPISGVGGGGLGSGSDDNALKQELPRSVHGLSGNWLAYWQY
EIGVSQQDAHFHFHQIRLQSFPGHSGAVKCVAPLSSEDFFLSGSKDRTVRLWPLYNYGDGTSETAPRLVY
TQHRKSVFFVGQLEAPQHVVSCDGAVHVWDPFTGKTLRTVEPLDSRVPLTAVAVMPAPHTSITMASSDST
LRFVDCRKPGLQHEFRLGGGLNPGLVRALAISPSGRSVVAGFSSGFMVLLDTRTGLVLRGWPAHEGDILQ
IKAVEGSVLVSSSSDHSLTVWKELEQKPTHHYKSASDPIHTFDLYGSEVVTGTVSNKIGVCSLLEPPSQA
TTKLSSENFRGTLTSLALLPTKRHLLLGSDNGVIRLLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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