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Report for CCDS45983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45983.1 Public Homo sapiens 19 ZNF433 24 110 108 CCDS HistoryNCBI Gene:163059Re-query CCDS DB by CCDS ID:45983.1Re-query CCDS DB by GeneID:163059See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344980.11 ENSP00000339767.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344980.11Link to Ensembl Protein Viewer:ENSP00000339767.6Re-query CCDS DB by Nucleotide ID:ENST00000344980Re-query CCDS DB by Protein ID:ENSP00000339767
Original member Current member NCBI NM_001080411.3 NP_001073880.1 Accepted alive Link to Nucleotide Sequence:NM_001080411.3Link to Protein Sequence:NP_001073880.1Re-query CCDS DB by Nucleotide ID:NM_001080411Re-query CCDS DB by Protein ID:NP_001073880Link to BLAST:NP_001073880.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073880.1 673 Q8N7K0-1 673 100% 0 0

Chromosomal Locations for CCDS 45983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12014845 12016666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12017876 12017936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12018166 12018301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12035537 12035539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGATGTTTCAGGATTCAGTGGCCTTTGAGGATGTGGCTGTGACCTTCACCCAAGAGGAGTGGGCTTTGC
TGGATCCTTCCCAGAAAAATCTCTGTAGAGATGTGATGCAAGAAACCTTCAGGAACCTGGCCTCTATAGG
GAAAAAATGGAAACCCCAGAACATATATGTAGAGTACGAAAATCTAAGGAGAAACCTAAGAATTGTGGGA
GAGAGACTCTTTGAAAGTAAAGAAGGTCATCAGCATGGAGAAATTTTGACCCAGGTTCCAGATGACATGC
TGAAGAAAACAACTACTGGAGTAAAATCATGCGAAAGCAGTGTGTATGGAGAAGTAGGCAGTGCTCATTC
ATCTCTTAATAGGCACATCAGAGATGACACTGGACACAAGGCATATGAGTATCAAGAATATGGACAGAAA
CCATATAAATGTAAATACTGTAAAAAACCTTTCAACTGTCTCTCCTCTGTTCAGACACATGAAAGGGCTC
ATAGTGGAAGGAAACTCTATGTTTGTGAGGAATGCGGAAAAACATTTATTTCCCATTCAAACCTTCAAAG
ACACAGGATAATGCACCGTGGAGATGGACCTTATAAGTGTAAATTTTGTGGGAAAGCCTTGATGTTTCTC
AGTTTGTATCTTATCCACAAACGAACTCACACTGGAGAGAAACCATATCAATGTAAACAGTGTGGTAAAG
CCTTTAGTCATTCTAGTAGCCTTCGAATACATGAAAGAACTCACACTGGGGAGAAGCCTTATAAATGTAA
TGAATGTGGGAAAGCATTCCATAGTTCCACATGCCTTCATGCTCATAAAAGAACTCACACTGGGGAGAAG
CCATATGAATGTAAACAGTGTGGGAAAGCCTTCAGCTCTTCCCATTCCTTTCAAATACATGAAAGAACTC
ACACGGGGGAGAAGCCATATGAATGTAAGGAATGTGGAAAAGCATTCAAGTGTCCCAGTTCTGTTCGCAG
ACATGAAAGAACCCACTCTAGGAAAAAACCCTATGAATGTAAACATTGTGGGAAAGTATTATCTTATCTT
ACCAGCTTTCAAAACCACTTGGGAATGCACACTGGAGAGATATCTCATAAATGTAAGATATGTGGGAAAG
CCTTTTATTCTCCCAGTTCACTTCAAACACATGAAAAAACTCACACTGGAGAGAAACCCTATAAATGCAA
CCAATGTGGTAAAGCCTTTAATTCTTCCAGTTCCTTCCGATATCATGAAAGAACTCACACTGGAGAGAAA
CCTTACGAGTGTAAGCAATGTGGGAAAGCCTTCAGATCTGCCTCACTCCTTCAAACACATGGTAGGACTC
ACACGGGAGAGAAACCCTATGCATGTAAGGAATGTGGAAAACCATTTAGTAATTTCTCTTTCTTTCAAAT
ACATGAAAGGATGCACAGAGAAGAGAAGCCGTATGAATGTAAGGGTTATGGGAAAACATTCAGTTTGCCC
AGTTTATTTCATAGACATGAAAGGACTCACACTGGAGGAAAAACCTATGAATGCAAGCAGTGTGGCAGAT
CCTTCAACTGTTCGAGCTCCTTTCGATATCATGGAAGGACTCACACTGGAGAGAAACCCTATGAATGCAA
GCAATGTGGAAAAGCCTTCAGATCTGCCTCACAGCTTCAAATTCATGGAAGGACTCACACTGGAGAGAAA
CCTTATGAATGTAAGCAGTGTGGGAAAGCCTTTGGATCTGCCTCACACCTTCAAATGCATGGAAGGACTC
ACACTGGAGAGAAACCCTATGAATGTAAGCAGTGTGGGAAGTCTTTTGGATGTGCCTCGCGACTTCAAAT
GCATGGAAGGACTCACACTGGAGAGAAACCGTATAAATGTAAGCAATGTGGGAAAGCTTTTGGATGTCCC
TCAAACCTTCGAAGGCATGGAAGGACTCACACTGGAGAGAAACCCTATAAATGTAACCAATGTGGTAAAG
TCTTTAGATGTTCTTCACAACTTCAAGTGCATGGAAGGGCTCACTGCATAGACACCCCATAA

Translation (673 aa):
MMFQDSVAFEDVAVTFTQEEWALLDPSQKNLCRDVMQETFRNLASIGKKWKPQNIYVEYENLRRNLRIVG
ERLFESKEGHQHGEILTQVPDDMLKKTTTGVKSCESSVYGEVGSAHSSLNRHIRDDTGHKAYEYQEYGQK
PYKCKYCKKPFNCLSSVQTHERAHSGRKLYVCEECGKTFISHSNLQRHRIMHRGDGPYKCKFCGKALMFL
SLYLIHKRTHTGEKPYQCKQCGKAFSHSSSLRIHERTHTGEKPYKCNECGKAFHSSTCLHAHKRTHTGEK
PYECKQCGKAFSSSHSFQIHERTHTGEKPYECKECGKAFKCPSSVRRHERTHSRKKPYECKHCGKVLSYL
TSFQNHLGMHTGEISHKCKICGKAFYSPSSLQTHEKTHTGEKPYKCNQCGKAFNSSSSFRYHERTHTGEK
PYECKQCGKAFRSASLLQTHGRTHTGEKPYACKECGKPFSNFSFFQIHERMHREEKPYECKGYGKTFSLP
SLFHRHERTHTGGKTYECKQCGRSFNCSSSFRYHGRTHTGEKPYECKQCGKAFRSASQLQIHGRTHTGEK
PYECKQCGKAFGSASHLQMHGRTHTGEKPYECKQCGKSFGCASRLQMHGRTHTGEKPYKCKQCGKAFGCP
SNLRRHGRTHTGEKPYKCNQCGKVFRCSSQLQVHGRAHCIDTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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