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Report for CCDS41369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41369.1 Public Homo sapiens 1 TMIGD3 24 110 108 CCDS HistoryNCBI Gene:57413Re-query CCDS DB by CCDS ID:41369.1Re-query CCDS DB by GeneID:57413See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41369.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369717.8 ENSP00000358731.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369717.8Link to Ensembl Protein Viewer:ENSP00000358731.4Re-query CCDS DB by Nucleotide ID:ENST00000369717Re-query CCDS DB by Protein ID:ENSP00000358731
Original member Current member NCBI NM_001081976.3 NP_001075445.1 Accepted alive Link to Nucleotide Sequence:NM_001081976.3Link to Protein Sequence:NP_001075445.1Re-query CCDS DB by Nucleotide ID:NM_001081976Re-query CCDS DB by Protein ID:NP_001075445Link to BLAST:NP_001075445.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001075445.1 266 P0DMS9-1 266 100% 0 0

Chromosomal Locations for CCDS 41369.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 111483687 111483757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111485740 111485840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111486586 111486652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111488677 111489024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111490656 111490762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 111563846 111563952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGGAAGGGTCTCCAGCAGGACCCATTGAGCAGAAGGAGGCCAGGTGGGAAAGCTCCTGGGAAGAGCAGC
CAGACTGGACACTGGGCTGCTTGAGTCCTGAGTCACAATTCAGAATTCCTGGGCTCCCTGGGTGCATTCT
ATCATTCCAGTTGAAAGTTTGCTTCCTTCCAGTCATGTGGCTCTTCATTCTACTCTCCTTGGCTCTCATT
TCAGATGCCATGGTCATGGATGAAAAGGTCAAGAGAAGCTTTGTGCTGGACACGGCTTCTGCCATCTGCA
ACTACAATGCCCACTACAAGAATCACCCCAAATACTGGTGCCGAGGCTATTTCCGTGACTACTGCAACAT
CATCGCCTTCTCCCCTAACAGCACCAATCATGTGGCCCTGAGGGACACAGGGAACCAGCTCATTGTCACT
ATGTCCTGCCTGACCAAAGAGGACACGGGCTGGTACTGGTGTGGCATCCAGCGGGACTTTGCCAGGGATG
ACATGGATTTTACAGAGCTGATTGTAACTGACGACAAAGGAACCCTGGCCAATGACTTTTGGTCTGGGAA
AGACCTATCAGGCAACAAAACCAGAAGCTGCAAGGCTCCCAAAGTTGTCCGCAAGGCTGACCGCTCCAGG
ACGTCCATTCTCATCATTTGCATACTGATCACGGGTTTGGGAATCATCTCTGTAATCAGTCATTTGACCA
AAAGGAGGAGAAGTCAAAGGAATAGAAGGGTAGGCAACACTTTGAAGCCCTTCTCGCGTGTCCTGACTCC
AAAGGAAATGGCTCCTACTGAACAGATGTGA

Translation (266 aa):
MEGSPAGPIEQKEARWESSWEEQPDWTLGCLSPESQFRIPGLPGCILSFQLKVCFLPVMWLFILLSLALI
SDAMVMDEKVKRSFVLDTASAICNYNAHYKNHPKYWCRGYFRDYCNIIAFSPNSTNHVALRDTGNQLIVT
MSCLTKEDTGWYWCGIQRDFARDDMDFTELIVTDDKGTLANDFWSGKDLSGNKTRSCKAPKVVRKADRSR
TSILIICILITGLGIISVISHLTKRRRSQRNRRVGNTLKPFSRVLTPKEMAPTEQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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