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Report for CCDS46637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46637.1 Public Homo sapiens 21 ATP5PF 24 110 108 CCDS HistoryNCBI Gene:522Re-query CCDS DB by CCDS ID:46637.1Re-query CCDS DB by GeneID:522See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46637.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457143.6 ENSP00000389649.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457143.6Link to Ensembl Protein Viewer:ENSP00000389649.2Re-query CCDS DB by Nucleotide ID:ENST00000457143Re-query CCDS DB by Protein ID:ENSP00000389649
Original member Current member NCBI NM_001003701.2 NP_001003701.1 Accepted alive Link to Nucleotide Sequence:NM_001003701.2Link to Protein Sequence:NP_001003701.1Re-query CCDS DB by Nucleotide ID:NM_001003701Re-query CCDS DB by Protein ID:NP_001003701Link to BLAST:NP_001003701.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003701.1 116 P18859-2 116 100% 0 0

Chromosomal Locations for CCDS 46637.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 25724640 25724677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 25725226 25725350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 25729631 25729801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 25734939 25734955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGCATTGCGATGGCGGAATCAGCATGATTCTTCAGAGGCTCTTCAGGTTCTCCTCTGTCATTCGGTCAG
CCGTCTCAGTCCATTTGCGGAGGAACATTGGTGTTACAGCAGTGGCATTTAATAAGGAACTTGATCCTAT
ACAGAAACTCTTTGTGGACAAGATTAGAGAATACAAATCTAAGCGACAGACATCTGGAGGACCTGTTGAT
GCTAGTTCAGAGTATCAGCAAGAGCTGGAGAGGGAGCTTTTTAAGCTCAAGCAAATGTTTGGTAATGCAG
ACATGAATACATTTCCCACCTTCAAATTTGAAGATCCCAAATTTGAAGTCATCGAAAAACCCCAGGCCTG
A

Translation (116 aa):
MHCDGGISMILQRLFRFSSVIRSAVSVHLRRNIGVTAVAFNKELDPIQKLFVDKIREYKSKRQTSGGPVD
ASSEYQQELERELFKLKQMFGNADMNTFPTFKFEDPKFEVIEKPQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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