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Report for CCDS31641.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31641.1 Public Homo sapiens 11 MAP6 24 110 108 CCDS HistoryNCBI Gene:4135Re-query CCDS DB by CCDS ID:31641.1Re-query CCDS DB by GeneID:4135See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31641.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304771.8 ENSP00000307093.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304771.8Link to Ensembl Protein Viewer:ENSP00000307093.3Re-query CCDS DB by Nucleotide ID:ENST00000304771Re-query CCDS DB by Protein ID:ENSP00000307093
Original member Current member NCBI NM_033063.2 NP_149052.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033063.2Link to Protein Sequence:NP_149052.1Re-query CCDS DB by Nucleotide ID:NM_033063Re-query CCDS DB by Protein ID:NP_149052Link to BLAST:NP_149052.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149052.1 813 Q96JE9-1 813 100% 0 0

Chromosomal Locations for CCDS 31641.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 75587059 75588184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75605808 75606004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75608109 75608322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 75667465 75668369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2442 nt):
ATGGCGTGGCCGTGCATCACGAGGGCCTGCTGCATCGCCCGCTTCTGGAACCAGTTGGACAAAGCGGACA
TCGCTGTGCCGCTGGTTTTCACCAAGTACTCGGAGGCCACCGAGCACCCGGGCGCCCCGCCGCAGCCACC
GCCGCCGCAGCAGCAGGCGCAGCCGGCGCTCGCGCCCCCCTCGGCGCGCGCGGTTGCCATAGAGACGCAG
CCAGCCCAGGGCGAGTTGGATGCAGTTGCCCGGGCAACGGGGCCAGCGCCTGGGCCTACCGGCGAGCGCG
AGCCGGCGGCGGGCCCCGGCCGGAGCGGGCCGGGCCCGGGCCTGGGCTCCGGCTCCACCTCCGGCCCCGC
GGACTCGGTGATGCGGCAGGATTACCGAGCCTGGAAGGTGCAGCGGCCCGAGCCCAGCTGCCGGCCGCGC
AGCGAATACCAGCCCTCCGACGCTCCCTTCGAGCGCGAGACCCAGTACCAGAAGGACTTCCGCGCCTGGC
CGCTGCCGCGCCGCGGGGACCACCCGTGGATCCCCAAGCCCGTGCAGATCTCTGCGGCCTCCCAGGCGTC
GGCGCCCATTCTCGGGGCGCCCAAGCGCCGGCCGCAGAGCCAGGAGCGCTGGCCAGTGCAGGCCGCCGCT
GAGGCCCGGGAGCAGGAGGCGGCCCCCGGCGGAGCGGGTGGCCTGGCGGCCGGAAAGGCGTCCGGGGCGG
ACGAGCGCGACACGCGCAGGAAGGCCGGGCCTGCCTGGATTGTGCGCCGCGCCGAGGGCCTGGGGCACGA
GCAGACGCCGCTGCCCGCGGCCCAGGCCCAGGTCCAGGCCACCGGCCCCGAGGCTGGCAGGGGGCGCGCC
GCGGCGGACGCCCTCAACCGGCAAATCCGCGAGGAGGTGGCGAGTGCAGTGAGCAGCTCCTACAGGAATG
AATTCAGGGCATGGACGGACATCAAGCCTGTGAAACCAATAAAGGCCAAGCCCCAGTACAAGCCCCCAGA
TGATAAGATGGTTCATGAGACCAGCTACAGTGCTCAGTTCAAAGGAGAGGCCAGCAAGCCAACAACAGCT
GACAATAAGGTCATTGATCGCAGAAGAATACGCAGCCTCTACAGCGAACCCTTCAAGGAACCCCCAAAGG
TGGAAAAACCTAGTGTTCAGAGTTCCAAACCAAAAAAGACCTCAGCGAGCCATAAGCCCACGAGGAAGGC
CAAAGACAAGCAGGCGGTGTCAGGCCAGGCTGCCAAGAAAAAGAGCGCGGAGGGCCCGAGTACCACCAAG
CCAGACGACAAGGAGCAAAGCAAAGAGATGAACAATAAACTGGCTGAGGCGAAAGAGAGCCTGGCTCAAC
CCGTCAGTGATTCAAGTAAGACTCAAGGTCCTGTAGCCACAGAGCCAGACAAGGATCAAGGTTCTGTGGT
CCCAGGCCTTCTGAAAGGTCAAGGTCCTATGGTGCAAGAGCCTCTGAAGAAGCAAGGTTCTGTGGTCCCA
GGGCCTCCAAAGGATCTAGGTCCCATGATCCCATTACCAGTCAAGGATCAAGATCACACGGTCCCTGAGC
CTTTAAAGAATGAAAGCCCTGTTATCTCAGCACCAGTCAAGGACCAAGGTCCCTCGGTCCCAGTTCCTCC
AAAGAATCAAAGTCCTATGGTTCCAGCAAAAGTTAAGGATCAAGGCTCTGTGGTACCAGAGTCTCTAAAG
GATCAAGGTCCTAGGATTCCTGAGCCTGTGAAGAATCAAGCTCCTATGGTCCCAGCACCTGTCAAGGATG
AAGGTCCCATGGTCTCAGCATCTGTCAAGGATCAAGGTCCCATGGTCTCAGCACCTGTCAAGGATCAAGG
TCCCATAGTCCCAGCACCTGTCAAGGGTGAAGGTCCCATAGTCCCAGCACCTGTCAAGGATGAAGGTCCC
ATGGTCTCAGCACCTATCAAGGATCAAGATCCCATGGTCCCAGAGCATCCGAAGGATGAAAGTGCCATGG
CCACAGCACCCATAAAGAATCAAGGTTCCATGGTCTCTGAGCCTGTAAAGAATCAAGGTTTAGTGGTCTC
AGGGCCAGTCAAGGATCAAGATGTTGTAGTCCCAGAGCATGCAAAGGTTCACGATTCTGCAGTTGTGGCA
CCTGTAAAGAATCAAGGTCCTGTGGTCCCCGAGTCCGTGAAGAATCAAGACCCCATTCTCCCAGTACTAG
TTAAGGATCAAGGCCCCACAGTCCTACAGCCTCCAAAGAATCAAGGTCGTATAGTCCCTGAACCTCTGAA
GAATCAAGTTCCTATAGTCCCAGTGCCTCTGAAGGATCAAGATCCTCTGGTGCCAGTACCAGCAAAGGAC
CAAGGTCCTGCAGTCCCTGAACCTCTGAAGACTCAAGGTCCCAGGGACCCTCAGCTACCTACTGTCTCAC
CTCTACCCCGAGTCATGATCCCAACTGCCCCCCATACGGAATACATTGAGAGCTCCCCTTGA

Translation (813 aa):
MAWPCITRACCIARFWNQLDKADIAVPLVFTKYSEATEHPGAPPQPPPPQQQAQPALAPPSARAVAIETQ
PAQGELDAVARATGPAPGPTGEREPAAGPGRSGPGPGLGSGSTSGPADSVMRQDYRAWKVQRPEPSCRPR
SEYQPSDAPFERETQYQKDFRAWPLPRRGDHPWIPKPVQISAASQASAPILGAPKRRPQSQERWPVQAAA
EAREQEAAPGGAGGLAAGKASGADERDTRRKAGPAWIVRRAEGLGHEQTPLPAAQAQVQATGPEAGRGRA
AADALNRQIREEVASAVSSSYRNEFRAWTDIKPVKPIKAKPQYKPPDDKMVHETSYSAQFKGEASKPTTA
DNKVIDRRRIRSLYSEPFKEPPKVEKPSVQSSKPKKTSASHKPTRKAKDKQAVSGQAAKKKSAEGPSTTK
PDDKEQSKEMNNKLAEAKESLAQPVSDSSKTQGPVATEPDKDQGSVVPGLLKGQGPMVQEPLKKQGSVVP
GPPKDLGPMIPLPVKDQDHTVPEPLKNESPVISAPVKDQGPSVPVPPKNQSPMVPAKVKDQGSVVPESLK
DQGPRIPEPVKNQAPMVPAPVKDEGPMVSASVKDQGPMVSAPVKDQGPIVPAPVKGEGPIVPAPVKDEGP
MVSAPIKDQDPMVPEHPKDESAMATAPIKNQGSMVSEPVKNQGLVVSGPVKDQDVVVPEHAKVHDSAVVA
PVKNQGPVVPESVKNQDPILPVLVKDQGPTVLQPPKNQGRIVPEPLKNQVPIVPVPLKDQDPLVPVPAKD
QGPAVPEPLKTQGPRDPQLPTVSPLPRVMIPTAPHTEYIESSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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