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Report for CCDS58824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58824.1 Public Homo sapiens 3 ARPP21 24 110 108 CCDS HistoryNCBI Gene:10777Re-query CCDS DB by CCDS ID:58824.1Re-query CCDS DB by GeneID:10777See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58824.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000444190.5 ENSP00000405276.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000444190.5Link to Ensembl Protein Viewer:ENSP00000405276.1Re-query CCDS DB by Nucleotide ID:ENST00000444190Re-query CCDS DB by Protein ID:ENSP00000405276
Original member Current member NCBI NM_001267617.2 NP_001254546.1 Accepted alive Link to Nucleotide Sequence:NM_001267617.2Link to Protein Sequence:NP_001254546.1Re-query CCDS DB by Nucleotide ID:NM_001267617Re-query CCDS DB by Protein ID:NP_001254546Link to BLAST:NP_001254546.1
Original member Current member NCBI NM_001385488.1 NP_001372417.1 Accepted alive Link to Nucleotide Sequence:NM_001385488.1Link to Protein Sequence:NP_001372417.1Re-query CCDS DB by Nucleotide ID:NM_001385488Re-query CCDS DB by Protein ID:NP_001372417Link to BLAST:NP_001372417.1
Original member Current member NCBI NM_001385489.1 NP_001372418.1 Accepted alive Link to Nucleotide Sequence:NM_001385489.1Link to Protein Sequence:NP_001372418.1Re-query CCDS DB by Nucleotide ID:NM_001385489Re-query CCDS DB by Protein ID:NP_001372418Link to BLAST:NP_001372418.1
Original member Current member NCBI NM_001385492.1 NP_001372421.1 Accepted alive Link to Nucleotide Sequence:NM_001385492.1Link to Protein Sequence:NP_001372421.1Re-query CCDS DB by Nucleotide ID:NM_001385492Re-query CCDS DB by Protein ID:NP_001372421Link to BLAST:NP_001372421.1
Original member Current member NCBI NM_001385497.1 NP_001372426.1 Accepted alive Link to Nucleotide Sequence:NM_001385497.1Link to Protein Sequence:NP_001372426.1Re-query CCDS DB by Nucleotide ID:NM_001385497Re-query CCDS DB by Protein ID:NP_001372426Link to BLAST:NP_001372426.1
Original member Current member NCBI NM_001385565.1 NP_001372494.1 Accepted alive Link to Nucleotide Sequence:NM_001385565.1Link to Protein Sequence:NP_001372494.1Re-query CCDS DB by Nucleotide ID:NM_001385565Re-query CCDS DB by Protein ID:NP_001372494Link to BLAST:NP_001372494.1
Original member Current member NCBI NM_001385574.1 NP_001372503.1 Accepted alive Link to Nucleotide Sequence:NM_001385574.1Link to Protein Sequence:NP_001372503.1Re-query CCDS DB by Nucleotide ID:NM_001385574Re-query CCDS DB by Protein ID:NP_001372503Link to BLAST:NP_001372503.1
Original member Current member NCBI NM_001385576.1 NP_001372505.1 Accepted alive Link to Nucleotide Sequence:NM_001385576.1Link to Protein Sequence:NP_001372505.1Re-query CCDS DB by Nucleotide ID:NM_001385576Re-query CCDS DB by Protein ID:NP_001372505Link to BLAST:NP_001372505.1
Original member Current member NCBI NM_001385577.1 NP_001372506.1 Accepted alive Link to Nucleotide Sequence:NM_001385577.1Link to Protein Sequence:NP_001372506.1Re-query CCDS DB by Nucleotide ID:NM_001385577Re-query CCDS DB by Protein ID:NP_001372506Link to BLAST:NP_001372506.1
Original member Current member NCBI NM_001385578.1 NP_001372507.1 Accepted alive Link to Nucleotide Sequence:NM_001385578.1Link to Protein Sequence:NP_001372507.1Re-query CCDS DB by Nucleotide ID:NM_001385578Re-query CCDS DB by Protein ID:NP_001372507Link to BLAST:NP_001372507.1
Original member Current member NCBI NM_001385580.1 NP_001372509.1 Accepted alive Link to Nucleotide Sequence:NM_001385580.1Link to Protein Sequence:NP_001372509.1Re-query CCDS DB by Nucleotide ID:NM_001385580Re-query CCDS DB by Protein ID:NP_001372509Link to BLAST:NP_001372509.1
Original member Current member NCBI NM_001385581.1 NP_001372510.1 Accepted alive Link to Nucleotide Sequence:NM_001385581.1Link to Protein Sequence:NP_001372510.1Re-query CCDS DB by Nucleotide ID:NM_001385581Re-query CCDS DB by Protein ID:NP_001372510Link to BLAST:NP_001372510.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001254546.1 793 Q9UBL0-4 793 100% 0 0
NP_001372417.1 793 Q9UBL0-4 793 100% 0 0
NP_001372418.1 793 Q9UBL0-4 793 100% 0 0
NP_001372421.1 793 Q9UBL0-4 793 100% 0 0
NP_001372426.1 793 Q9UBL0-4 793 100% 0 0
NP_001372494.1 793 Q9UBL0-4 793 100% 0 0
NP_001372503.1 793 Q9UBL0-4 793 100% 0 0
NP_001372505.1 793 Q9UBL0-4 793 100% 0 0
NP_001372506.1 793 Q9UBL0-4 793 100% 0 0
NP_001372507.1 793 Q9UBL0-4 793 100% 0 0
NP_001372509.1 793 Q9UBL0-4 793 100% 0 0
NP_001372510.1 793 Q9UBL0-4 793 100% 0 0

Chromosomal Locations for CCDS 58824.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 35681752 35681880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35682848 35682889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35683726 35683815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35687739 35687883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35689307 35689385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35690081 35690140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35690865 35691005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35706974 35707082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35715439 35715476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35721605 35721834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35729303 35729536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35737178 35737362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35738214 35738318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35739317 35739577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35743839 35743965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35792382 35792530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 35793701 35793958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2382 nt):
ATGTCTGAGCAAGGAGACCTGAATCAGGCAATAGCAGAGGAAGGAGGGACTGAGCAGGAGACGGCCACTC
CAGAGAACGGCATTGTTAAATCAGAAAGTCTGGATGAAGAGGAGAAACTGGAACTGCAGAGGCGGCTGGA
GGCTCAGAATCAAGAAAGAAGAAAATCCAAGTCAGGAGCAGGAAAAGGTAAACTGACTCGCAGCCTTGCT
GTCTGTGAGGAATCTTCTGCCAGACCAGGAGGTGAAAGTCTTCAGGATCAGGAATCAATTCATTTACAGC
TTTCCAGTTTTTCCAGCCTGCAAGAGGAGGATAAATCTAGGAAAGATGACTCTGAAAGAGAAAAAGAAAA
GGATAAAAACAAAGATAAAACCTCTGAAAAACCCAAGATCAGAATGTTATCAAAAGATTGCAGCCAAGAA
TACACGGATTCTACAGGCATAGACTTACACGAGTTTCTGATTAACACATTAAAGAATAATTCCAGGGACA
GGATGATACTTTTGAAAATGGAGCAGGAAATTATTGATTTCATTGCTGACAACAATAATCATTATAAAAA
GTTCCCTCAGATGTCATCGTATCAGAGGATGCTTGTCCATCGAGTGGCAGCTTATTTTGGATTGGATCAC
AATGTGGATCAAACAGGAAAATCTGTTATCATCAACAAGACCAGCAGCACCAGAATACCAGAGCAAAGGT
TTTGTGAACATTTAAAAGATGAAAAAGGTGAAGAATCCCAGAAGCGGTTTATCTTGAAGCGAGATAACTC
TAGTATTGATAAAGAAGACAATCAGTCAGTTTGCTCCCAGGAAAGCCTTTTTGTGGAAAACAGGGGCAAC
AGAGATGGCTCAGGGAGAACATCTGGGAGTCGACAGAGCAGCTCAGAAAATGAACTCAAGTGGTCTGACC
ACCAAAGGGCCTGGAGCAGCACAGACTCCGACAGTTCCAACCGCAATCTAAAGCCCGCCATGACCAAGAC
GGCGAGTTTTGGGGGCATCACGGTGCTGACCAGGGGTGACAGCACTTCCAGTACTAGGAGTACCGGGAAG
CTGTCCAAAGCAGGTTCCGAGTCTTCCAGCAGTGCAGGCTCCTCAGGATCGCTGTCCCGCACCCATCCAC
CTCTCCAGAGCACACCCCTAGTCTCAGGTGTGGCAGCTGGCTCTCCAGGCTGTGTGCCTTATCCAGAGAA
TGGAATAGGGGGCCAGGTTGCTCCCAGCAGCACCAGCTACATCCTCCTTCCACTTGAAGCTGCAACAGGC
ATCCCGCCTGGAAGCATCCTTCTTAATCCACACACAGGCCAGCCCTTTGTGAATCCCGATGGAACTCCTG
CAATATACAACCCACCCACCAGTCAGCAGCCCCTGCGAAGCGCCATGGTGGGGCAGTCCCAACAGCAGCC
ACCACAGCAGCAGCCCTCCCCGCAGCCCCAACAGCAGGTCCAGCCACCGCAGCCACAGATGGCAGGCCCT
CTGGTCACTCAGTCTGTCCAGGGGCTGCAGGCTTCCTCCCAGTCAGTGCAATATCCAGCAGTCTCTTTTC
CTCCCCAGCACCTCCTACCTGTGTCTCCAACGCAGCACTTTCCCATGAGAGATGATGTGGCAACACAGTT
TGGCCAGATGACCCTGAGCCGGCAGTCCTCGGGGGAGACTCCTGAACCCCCATCAGGTCCTGTCTACCCA
TCCTCCCTTATGCCACAGCCGGCCCAGCAGCCCAGCTATGTAATCGCCTCTACAGGCCAGCAGCTTCCTA
CAGGAGGATTCTCAGGCTCTGGCCCTCCCATCTCCCAGCAGGTCCTCCAGCCCCCTCCCTCACCACAGGG
ATTTGTGCAACAGCCTCCGCCTGCACAGATGCCTGTATATTATTACCCATCTGGTCAGTACCCTACCTCA
ACCACGCAACAGTACCGGCCCATGGCCCCGGTTCAGTACAACGCTCAGAGGAGTCAACAGATGCCACAGG
CAGCACAGCAAGCAGGTTACCAGCCAGTCTTGTCTGGTCAACAGGGATTCCAAGGCCTAATAGGAGTGCA
GCAGCCACCTCAGAGTCAGAACGTGATAAATAACCAACAAGGAACTCCGGTGCAAAGCGTGATGGTTTCC
TACCCAACAATGTCTTCTTATCAGGTGCCAATGACCCAGGGTTCTCAAGGACTGCCCCAGCAGTCATACC
AACAGCCAATCATGCTACCTAACCAGGCAGGTCAAGGGTCACTCCCAGCCACTGGAATGCCTGTTTACTG
TAATGTCACACCGCCCACCCCTCAGAACAACCTTAGGCTGATTGGCCCACACTGCCCCTCCAGCACTGTC
CCAGTGATGTCAGCTAGCTGCAGAACAAACTGTGCAAGTATGAGCAATGCTGGTTGGCAGGTCAAATTCT
GA

Translation (793 aa):
MSEQGDLNQAIAEEGGTEQETATPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLA
VCEESSARPGGESLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEKPKIRMLSKDCSQE
YTDSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQMSSYQRMLVHRVAAYFGLDH
NVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKRFILKRDNSSIDKEDNQSVCSQESLFVENRGN
RDGSGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSNRNLKPAMTKTASFGGITVLTRGDSTSSTRSTGK
LSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGSPGCVPYPENGIGGQVAPSSTSYILLPLEAATG
IPPGSILLNPHTGQPFVNPDGTPAIYNPPTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGP
LVTQSVQGLQASSQSVQYPAVSFPPQHLLPVSPTQHFPMRDDVATQFGQMTLSRQSSGETPEPPSGPVYP
SSLMPQPAQQPSYVIASTGQQLPTGGFSGSGPPISQQVLQPPPSPQGFVQQPPPAQMPVYYYPSGQYPTS
TTQQYRPMAPVQYNAQRSQQMPQAAQQAGYQPVLSGQQGFQGLIGVQQPPQSQNVINNQQGTPVQSVMVS
YPTMSSYQVPMTQGSQGLPQQSYQQPIMLPNQAGQGSLPATGMPVYCNVTPPTPQNNLRLIGPHCPSSTV
PVMSASCRTNCASMSNAGWQVKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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