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Report for CCDS76035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76035.1 Public Homo sapiens X CT45A10 24 110 108 CCDS HistoryNCBI Gene:102723631Re-query CCDS DB by CCDS ID:76035.1Re-query CCDS DB by GeneID:102723631See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617981.1 ENSP00000481558.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617981.1Link to Ensembl Protein Viewer:ENSP00000481558.1Re-query CCDS DB by Nucleotide ID:ENST00000617981Re-query CCDS DB by Protein ID:ENSP00000481558
Original member Current member EBI ENST00000611668.4 ENSP00000484601.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611668.4Link to Ensembl Protein Viewer:ENSP00000484601.1Re-query CCDS DB by Nucleotide ID:ENST00000611668Re-query CCDS DB by Protein ID:ENSP00000484601
Original member Current member EBI ENST00000682849.1 ENSP00000507965.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682849.1Link to Ensembl Protein Viewer:ENSP00000507965.1Re-query CCDS DB by Nucleotide ID:ENST00000682849Re-query CCDS DB by Protein ID:ENSP00000507965
Original member Current member NCBI NM_001291527.2 NP_001278456.1 Accepted alive Link to Nucleotide Sequence:NM_001291527.2Link to Protein Sequence:NP_001278456.1Re-query CCDS DB by Nucleotide ID:NM_001291527Re-query CCDS DB by Protein ID:NP_001278456Link to BLAST:NP_001278456.1
Original member Current member NCBI NM_001291528.2 NP_001278457.1 Accepted alive Link to Nucleotide Sequence:NM_001291528.2Link to Protein Sequence:NP_001278457.1Re-query CCDS DB by Nucleotide ID:NM_001291528Re-query CCDS DB by Protein ID:NP_001278457Link to BLAST:NP_001278457.1
Original member Current member NCBI NM_001291529.2 NP_001278458.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001291529.2Link to Protein Sequence:NP_001278458.1Re-query CCDS DB by Nucleotide ID:NM_001291529Re-query CCDS DB by Protein ID:NP_001278458Link to BLAST:NP_001278458.1
Original member Current member NCBI NM_001291530.2 NP_001278459.1 Accepted alive Link to Nucleotide Sequence:NM_001291530.2Link to Protein Sequence:NP_001278459.1Re-query CCDS DB by Nucleotide ID:NM_001291530Re-query CCDS DB by Protein ID:NP_001278459Link to BLAST:NP_001278459.1
Original member Current member NCBI NM_001385219.1 NP_001372148.1 Accepted alive Link to Nucleotide Sequence:NM_001385219.1Link to Protein Sequence:NP_001372148.1Re-query CCDS DB by Nucleotide ID:NM_001385219Re-query CCDS DB by Protein ID:NP_001372148Link to BLAST:NP_001372148.1
Original member Current member NCBI NM_001385220.1 NP_001372149.1 Accepted alive Link to Nucleotide Sequence:NM_001385220.1Link to Protein Sequence:NP_001372149.1Re-query CCDS DB by Nucleotide ID:NM_001385220Re-query CCDS DB by Protein ID:NP_001372149Link to BLAST:NP_001372149.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278456.1 189 P0DMU9 189 100% 0 0
NP_001278457.1 189 P0DMU9 189 100% 0 0
NP_001278458.1 189 P0DMU9 189 100% 0 0
NP_001278459.1 189 P0DMU9 189 100% 0 0
NP_001372148.1 189 P0DMU9 189 100% 0 0
NP_001372149.1 189 P0DMU9 189 100% 0 0

Chromosomal Locations for CCDS 76035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 135881258 135881315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135882536 135882629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135883008 135883256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135885176 135885344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGACCGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTCCCAGGGAATGTGACA
GTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTGTTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTAT
TGCAGGCTCTGCCATGTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAATTGGAT
TCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATGGGATGATGCAGAAACCTGGTAGCAATGCACCTG
TGGGAGGAAACGTTACCAGCAATTTCTCTGGAGATGACCTAGAATGCAGAGGAATAGCCTCCTCTCCCAA
AAGCCAACAAGAAATTAATGCTGATATAAAATGTCAAGTAGTGAAGGAAATCCGATGCCTTGGACGAAAA
TATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCAAGGACCTACTGCAGTCAGGAAACGATTTTTTGAAT
CCATCATCAAGGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTGAAACG
TATGATTTGA

Translation (189 aa):
MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLD
SQIDDFTGFSKDGMMQKPGSNAPVGGNVTSNFSGDDLECRGIASSPKSQQEINADIKCQVVKEIRCLGRK
YEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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