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Report for CCDS11220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11220.1 Public Homo sapiens 17 WSB1 24 110 108 CCDS HistoryNCBI Gene:26118Re-query CCDS DB by CCDS ID:11220.1Re-query CCDS DB by GeneID:26118See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11220.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262394.7 ENSP00000262394.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262394.7Link to Ensembl Protein Viewer:ENSP00000262394.2Re-query CCDS DB by Nucleotide ID:ENST00000262394Re-query CCDS DB by Protein ID:ENSP00000262394
Original member Current member NCBI NM_015626.10 NP_056441.6 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015626.10Link to Protein Sequence:NP_056441.6Re-query CCDS DB by Nucleotide ID:NM_015626Re-query CCDS DB by Protein ID:NP_056441Link to BLAST:NP_056441.6

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056441.6 421 Q9Y6I7-1 421 100% 0 0

Chromosomal Locations for CCDS 11220.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 27294396 27294435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27301788 27301956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27303367 27303635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27304780 27304911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27306782 27306882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27309100 27309272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27310061 27310174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27311509 27311616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 27312210 27312369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1266 nt):
ATGGCCAGCTTTCCCCCGAGGGTCAACGAGAAAGAGATCGTGAGATTACGTACTATAGGTGAACTTTTAG
CTCCTGCAGCTCCTTTTGACAAGAAATGTGGTCGTGAAAATTGGACTGTTGCTTTTGCTCCAGATGGTTC
ATACTTTGCTTGGTCACAAGGACATCGCACAGTAAAGCTTGTTCCGTGGTCCCAGTGCCTTCAGAACTTT
CTCTTGCATGGCACCAAGAATGTTACCAATTCAAGCAGTTTAAGATTGCCAAGACAAAATAGTGATGGTG
GTCAGAAAAATAAGCCTCGTGAACATATTATAGACTGTGGAGATATAGTCTGGAGTCTTGCTTTTGGGTC
ATCAGTTCCAGAAAAACAGAGTCGCTGTGTAAATATAGAATGGCATCGCTTCAGATTTGGACAAGATCAG
CTACTTCTTGCTACAGGGTTGAACAATGGGCGTATCAAAATATGGGATGTATATACAGGAAAACTCCTCC
TTAACTTGGTAGATCATACTGAAGTGGTCAGAGATTTAACTTTTGCTCCAGATGGAAGCTTGATCCTGGT
GTCAGCTTCAAGAGACAAAACTCTCAGAGTATGGGACCTGAAAGATGATGGAAACATGATGAAAGTATTG
AGGGGGCATCAGAATTGGGTGTACAGCTGTGCATTCTCTCCTGACTCTTCTATGCTGTGTTCAGTCGGAG
CCAGTAAAGCAGTTTTCCTTTGGAATATGGATAAATACACCATGATACGGAAACTAGAAGGACATCACCA
TGATGTGGTAGCTTGTGACTTTTCTCCTGATGGAGCATTACTGGCTACTGCATCTTATGATACTCGAGTA
TATATCTGGGATCCACATAATGGAGACATTCTGATGGAATTTGGGCACCTGTTTCCCCCACCTACTCCAA
TATTTGCTGGAGGAGCAAATGACCGGTGGGTACGATCTGTATCTTTTAGCCATGATGGACTGCATGTTGC
AAGCCTTGCTGATGATAAAATGGTGAGGTTCTGGAGAATTGATGAGGATTATCCAGTGCAAGTTGCACCT
TTGAGCAATGGTCTTTGCTGTGCCTTCTCTACTGATGGCAGTGTTTTAGCTGCTGGGACACATGACGGAA
GTGTGTATTTTTGGGCCACTCCACGGCAGGTCCCTAGCCTGCAACATTTATGTCGCATGTCAATCCGAAG
AGTGATGCCCACCCAAGAAGTTCAGGAGCTGCCGATTCCTTCCAAGCTTTTGGAGTTTCTCTCGTATCGT
ATTTAG

Translation (421 aa):
MASFPPRVNEKEIVRLRTIGELLAPAAPFDKKCGRENWTVAFAPDGSYFAWSQGHRTVKLVPWSQCLQNF
LLHGTKNVTNSSSLRLPRQNSDGGQKNKPREHIIDCGDIVWSLAFGSSVPEKQSRCVNIEWHRFRFGQDQ
LLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL
RGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDTRV
YIWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLADDKMVRFWRIDEDYPVQVAP
LSNGLCCAFSTDGSVLAAGTHDGSVYFWATPRQVPSLQHLCRMSIRRVMPTQEVQELPIPSKLLEFLSYR
I


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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