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Report for CCDS3120.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3120.1 Public Homo sapiens 3 GRK7 24 110 108 CCDS HistoryNCBI Gene:131890Re-query CCDS DB by CCDS ID:3120.1Re-query CCDS DB by GeneID:131890See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3120.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264952.2 ENSP00000264952.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000264952.2Link to Ensembl Protein Viewer:ENSP00000264952.2Re-query CCDS DB by Nucleotide ID:ENST00000264952Re-query CCDS DB by Protein ID:ENSP00000264952
Original member Current member EBI ENST00000682958.1 ENSP00000508022.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682958.1Link to Ensembl Protein Viewer:ENSP00000508022.1Re-query CCDS DB by Nucleotide ID:ENST00000682958Re-query CCDS DB by Protein ID:ENSP00000508022
Original member Current member NCBI NM_139209.3 NP_631948.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139209.3Link to Protein Sequence:NP_631948.1Re-query CCDS DB by Nucleotide ID:NM_139209Re-query CCDS DB by Protein ID:NP_631948Link to BLAST:NP_631948.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_631948.1 553 Q8WTQ7 553 100% 0 0

Chromosomal Locations for CCDS 3120.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 141778285 141778896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141780374 141780811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141807645 141807919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141816714 141817050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1662 nt):
ATGGTGGACATGGGGGCCCTGGACAACCTGATCGCCAACACCGCCTACCTGCAGGCCCGGAAGCCCTCGG
ACTGCGACAGCAAAGAGCTGCAGCGGCGGCGGCGTAGCCTGGCCCTGCCCGGGCTGCAGGGCTGCGCGGA
GCTCCGCCAGAAGCTGTCCCTGAACTTCCACAGCCTGTGTGAGCAGCAGCCCATCGGTCGCCGCCTCTTC
CGTGACTTCCTAGCCACAGTGCCCACGTTCCGCAAGGCGGCAACCTTCCTAGAGGACGTGCAGAACTGGG
AGCTGGCCGAGGAGGGACCCACCAAAGACAGCGCGCTGCAGGGGCTGGTGGCCACTTGTGCGAGTGCCCC
TGCCCCGGGGAACCCGCAACCCTTCCTCAGCCAGGCCGTGGCCACCAAGTGCCAAGCAGCCACCACTGAG
GAAGAGCGAGTGGCTGCAGTGACGCTGGCCAAGGCTGAGGCCATGGCTTTCTTGCAAGAGCAGCCCTTTA
AGGATTTCGTGACCAGCGCCTTCTACGACAAGTTTCTGCAGTGGAAACTCTTCGAGATGCAACCAGTGTC
AGACAAGTACTTCACTGAGTTCAGAGTGCTGGGGAAAGGTGGTTTTGGGGAGGTATGTGCCGTCCAGGTG
AAAAACACTGGGAAGATGTATGCCTGTAAGAAACTGGACAAGAAGCGGCTGAAGAAGAAAGGTGGCGAGA
AGATGGCTCTCTTGGAAAAGGAAATCTTGGAGAAGGTCAGCAGCCCTTTCATTGTCTCTCTGGCCTATGC
CTTTGAGAGCAAGACCCATCTCTGCCTTGTCATGAGCCTGATGAATGGGGGAGACCTCAAGTTCCACATC
TACAACGTGGGCACGCGTGGCCTGGACATGAGCCGGGTGATCTTTTACTCGGCCCAGATAGCCTGTGGGA
TGCTGCACCTCCATGAACTCGGCATCGTCTATCGGGACATGAAGCCTGAGAATGTGCTTCTGGATGACCT
CGGCAACTGCAGGTTATCTGACCTGGGGCTGGCCGTGGAGATGAAGGGTGGCAAGCCCATCACCCAGAGG
GCTGGAACCAATGGTTACATGGCTCCTGAGATCCTAATGGAAAAGGTAAGTTATTCCTATCCTGTGGACT
GGTTTGCCATGGGATGCAGCATTTATGAAATGGTTGCTGGACGAACACCATTCAAAGATTACAAGGAAAA
GGTCAGTAAAGAGGATCTGAAGCAAAGAACTCTGCAAGACGAGGTCAAATTCCAGCATGATAACTTCACA
GAGGAAGCAAAAGATATTTGCAGGCTCTTCTTGGCTAAGAAACCAGAGCAACGCTTAGGAAGCAGAGAAA
AGTCTGATGATCCCAGGAAACATCATTTCTTTAAAACGATCAACTTTCCTCGCCTGGAAGCTGGCCTAAT
TGAACCCCCATTTGTGCCAGACCCTTCAGTGGTTTATGCCAAAGACATCGCTGAAATTGATGATTTCTCT
GAGGTTCGGGGGGTGGAATTTGATGACAAAGATAAGCAGTTCTTCAAAAACTTTGCGACAGGTGCTGTTC
CTATAGCATGGCAGGAAGAAATTATAGAAACGGGACTGTTTGAGGAACTGAATGACCCCAACAGACCTAC
GGGTTGTGAGGAGGGTAATTCATCCAAGTCTGGCGTGTGTTTGTTATTGTAA

Translation (553 aa):
MVDMGALDNLIANTAYLQARKPSDCDSKELQRRRRSLALPGLQGCAELRQKLSLNFHSLCEQQPIGRRLF
RDFLATVPTFRKAATFLEDVQNWELAEEGPTKDSALQGLVATCASAPAPGNPQPFLSQAVATKCQAATTE
EERVAAVTLAKAEAMAFLQEQPFKDFVTSAFYDKFLQWKLFEMQPVSDKYFTEFRVLGKGGFGEVCAVQV
KNTGKMYACKKLDKKRLKKKGGEKMALLEKEILEKVSSPFIVSLAYAFESKTHLCLVMSLMNGGDLKFHI
YNVGTRGLDMSRVIFYSAQIACGMLHLHELGIVYRDMKPENVLLDDLGNCRLSDLGLAVEMKGGKPITQR
AGTNGYMAPEILMEKVSYSYPVDWFAMGCSIYEMVAGRTPFKDYKEKVSKEDLKQRTLQDEVKFQHDNFT
EEAKDICRLFLAKKPEQRLGSREKSDDPRKHHFFKTINFPRLEAGLIEPPFVPDPSVVYAKDIAEIDDFS
EVRGVEFDDKDKQFFKNFATGAVPIAWQEEIIETGLFEELNDPNRPTGCEEGNSSKSGVCLLL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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