CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS9096.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
9096.1 |
Public |
Homo sapiens |
12 |
GLT8D2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:83468](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:9096.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:83468](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 9096.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000360814.9 |
ENSP00000354053.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000360814.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000354053.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000360814](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000354053](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000548660.5 |
ENSP00000447450.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000548660.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000447450.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000548660](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000447450](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000546436.5 |
ENSP00000449750.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000546436.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000449750.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000546436](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000449750](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001316967.2 |
NP_001303896.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001316967.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001303896.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001316967](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001303896](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001303896.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384711.1 |
NP_001371640.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384711.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371640.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384711](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371640](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371640.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384713.1 |
NP_001371642.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384713.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371642.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384713](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371642](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371642.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384715.1 |
NP_001371644.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384715.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371644.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384715](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371644](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371644.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384716.1 |
NP_001371645.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384716.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371645.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384716](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371645](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371645.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384717.1 |
NP_001371646.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384717.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371646.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384717](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371646](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371646.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384718.1 |
NP_001371647.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384718.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371647.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384718](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371647](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371647.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384719.1 |
NP_001371648.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384719.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371648.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384719](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371648](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371648.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384720.1 |
NP_001371649.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384720.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371649.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384720](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371649](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371649.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384721.1 |
NP_001371650.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384721.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371650.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384721](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371650](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371650.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384722.1 |
NP_001371651.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384722.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371651.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384722](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371651](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371651.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_031302.5 |
NP_112592.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_031302.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_112592.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_031302](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_112592](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_112592.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 9096.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1050 nt): ATGGCTCTGTTACGAAAAATTAATCAGGTGCTGCTGTTCCTTCTGATCGTGACCCTCTGTGTGATTCTGT ATAAGAAAGTTCATAAGGGGACTGTGCCCAAGAATGACGCAGATGATGAATCCGAGACTCCTGAAGAACT GGAAGAAGAGATTCCTGTGGTGATTTGTGCTGCAGCAGGGAGGATGGGTGCCACTATGGCTGCCATCAAT AGCATCTACAGCAACACTGACGCCAACATCTTGTTCTATGTAGTGGGACTCCGGAATACTCTGACTCGAA TACGAAAATGGATTGAACATTCCAAACTGAGAGAAATAAACTTTAAAATCGTGGAATTCAACCCGATGGT CCTCAAAGGGAAGATCAGACCAGACTCATCGAGGCCTGAATTGCTCCAGCCTCTGAACTTTGTTCGATTT TATCTCCCTCTACTTATCCACCAACACGAGAAAGTCATCTATTTGGACGATGATGTAATTGTACAAGGTG ATATCCAAGAACTGTATGACACCACCTTGGCCCTGGGCCACGCGGCGGCTTTCTCAGATGACTGCGATTT GCCCTCTGCTCAGGACATAAACAGACTCGTGGGACTTCAGAACACATATATGGGCTATCTGGACTACCGG AAGAAGGCCATCAAGGACCTTGGCATCAGCCCCAGCACCTGCTCTTTCAATCCTGGTGTGATTGTTGCCA ACATGACAGAATGGAAGCACCAGCGCATCACCAAGCAATTGGAGAAATGGATGCAAAAGAATGTGGAGGA AAACCTCTATAGCAGCTCCCTGGGAGGAGGGGTGGCCACCTCCCCAATGCTGATTGTGTTTCATGGGAAA TATTCCACAATTAACCCCCTGTGGCACATAAGGCACCTGGGCTGGAATCCAGATGCCAGATATTCGGAGC ATTTTCTGCAGGAAGCTAAATTACTCCACTGGAATGGAAGACATAAACCTTGGGACTTCCCTAGTGTTCA CAACGACTTATGGGAAAGCTGGTTTGTTCCTGACCCTGCAGGGATATTTAAACTCAATCACCATAGCTGA
Translation (349 aa): MALLRKINQVLLFLLIVTLCVILYKKVHKGTVPKNDADDESETPEELEEEIPVVICAAAGRMGATMAAIN SIYSNTDANILFYVVGLRNTLTRIRKWIEHSKLREINFKIVEFNPMVLKGKIRPDSSRPELLQPLNFVRF YLPLLIHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQDINRLVGLQNTYMGYLDYR KKAIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGK YSTINPLWHIRHLGWNPDARYSEHFLQEAKLLHWNGRHKPWDFPSVHNDLWESWFVPDPAGIFKLNHHS
|