NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS4430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4430.1 Public Homo sapiens 5 PROP1 24 110 108 CCDS HistoryNCBI Gene:5626Re-query CCDS DB by CCDS ID:4430.1Re-query CCDS DB by GeneID:5626See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4430.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308304.2 ENSP00000311290.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308304.2Link to Ensembl Protein Viewer:ENSP00000311290.2Re-query CCDS DB by Nucleotide ID:ENST00000308304Re-query CCDS DB by Protein ID:ENSP00000311290
Original member Current member NCBI NM_006261.5 NP_006252.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006261.5Link to Protein Sequence:NP_006252.4Re-query CCDS DB by Nucleotide ID:NM_006261Re-query CCDS DB by Protein ID:NP_006252Link to BLAST:NP_006252.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006252.4 226 O75360 226 100% 0 0

Chromosomal Locations for CCDS 4430.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 177992709 177993047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177994106 177994338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 177995825 177995933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGAAGCAGAAAGGAGGCGCCAGGCTGAGAAGCCAAAGAAGGGGCGAGTCGGCAGCAACCTGTTGCCTG
AGAGACACCCGGCCACTGGGACCCCGACCACCACGGTGGACTCGAGTGCTCCACCCTGCAGAAGGCTCCC
TGGTGCAGGAGGGGGGAGATCAAGGTTCTCCCCGCAAGGAGGACAGAGGGGCCGCCCGCACTCCCGGCGC
CGCCACCGCACCACCTTCAGCCCAGTGCAGTTGGAACAGCTGGAGTCAGCCTTTGGGAGGAACCAGTACC
CCGACATCTGGGCCCGAGAGAGTCTTGCCCGGGACACTGGCCTCAGTGAGGCCCGAATCCAGGTCTGGTT
CCAGAACCGCAGAGCTAAGCAACGGAAGCAAGAGCGCTCACTGCTTCAGCCTCTGGCCCATCTGTCTCCT
GCCGCCTTTTCCAGCTTCTTGCCAGAGTCCACTGCTTGCCCCTATTCTTACGCAGCACCACCACCACCAG
TGACCTGCTTCCCTCACCCCTACAGCCATGCCCTCCCTTCCCAGCCCTCCACAGGAGGCGCCTTTGCTTT
GTCACACCAGTCTGAGGACTGGTACCCTACCTTGCACCCAGCCCCTGCCGGCCATCTGCCCTGCCCCCCA
CCCCCTCCCATGCTCCCCCTCAGCCTTGAGCCATCCAAGTCCTGGAACTGA

Translation (226 aa):
MEAERRRQAEKPKKGRVGSNLLPERHPATGTPTTTVDSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRR
RHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLSP
AAFSSFLPESTACPYSYAAPPPPVTCFPHPYSHALPSQPSTGGAFALSHQSEDWYPTLHPAPAGHLPCPP
PPPMLPLSLEPSKSWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH