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Report for CCDS63029.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
63029.1 |
Public |
Homo sapiens |
2 |
GTDC1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:79712](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:63029.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:79712](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 63029.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000241391.9 |
ENSP00000241391.6 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000241391.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000241391.6](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000241391](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000241391](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000392871.6 |
ENSP00000376610.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000392871.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000376610.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000392871](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000376610](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001284233.4 |
NP_001271162.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001284233.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001271162.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001284233](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001271162](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001271162.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001354360.2 |
NP_001341289.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001354360.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001341289.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001354360](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001341289](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001341289.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376318.2 |
NP_001363247.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376318.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363247.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376318](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363247](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363247.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001376319.2 |
NP_001363248.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001376319.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001363248.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001376319](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001363248](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001363248.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 63029.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1131 nt): ATGAGTATCCTCATCATTGAAGCATTCTATGGAGGCTCCCATAAACAGCTGGTGGATCTTCTTCAAGAAG AGTTAGGAGACTGTGTCGTTTATACCCTTCCTGCAAAGAAATGGCATTGGAGAGCCCGGACATCTGCTTT ATATTTCTCTCAGACCATTCCCATCAGTGAGCATTACAGGACCCTCTTTGCAAGTTCAGTGCTTAACCTG ACCGAACTGGCTGCCCTTCGGCCTGACCTTGGGAAACTGAAAAAGATTCTGTATTTTCACGAGAACCAGT TGATATATCCTGTCAAGAAATGTCAGGAGAGGGATTTCCAATATGGATACAACCAAATTCTTTCATGCCT GGTGGCTGATGTGGTTGTATTCAACTCAGTTTTTAATATGGAATCATTTCTCACTTCCATGGGAAAATTT ATGAAGCTGATTCCTGATCACAGACCCAAGGATCTGGAAAGCATCATCAGACCCAAGTGCCAAGTTATTT ACTTTCCCATCAGGTTTCCTGATGTGAGCAGATTCATGCCCAAGCACAAAACAACCCATTTAAAGAAGAT GCTCGGCCTTAAAGGAAATGGCGGTGCGGTTCTGTCCATGGCCCTTCCTTTTCAGCCAGAGCAGAGAGAT TCAGAGGATTTATTGAAGAATTTTAATTCAGAGTGTGATACACACTGTGGCCTTGATACTGCACGACAAG AATATTTGGGTAACTCATTAAGACAGGAATCAGACTTGAAAAAATCCACCTCGTCAGATAATTCAAGCTC TCATCATGGTGAAAATAAACAAAATCTGACTGTTGATCCCTGTGACATTTTGGGTGGAGTTGATAATCAG CAAAGACTGCTACACATTGTCTGGCCTCACAGGTGGGAGCATGATAAAGATCCAGAAAGCTTTTTTAAGG TATTAATGCATCTTAAAGACTTAGGACTCAATTTCCACGTGTCTGTACTTGGAGAAACCTTCACAGATGT CCCAGGTTGGAAGCTGTGTACTGTGGGTGTTACCCACTTTGTCCTAAAGATTTGGTTTATCCCGAAATAT TTCCAGCTGAATATCTGTATTCTACACCTGAACAGCTTTCAAAAAGGCTCCAGAATTTCTGCAAGAGACC AGATATTATAA
Translation (376 aa): MSILIIEAFYGGSHKQLVDLLQEELGDCVVYTLPAKKWHWRARTSALYFSQTIPISEHYRTLFASSVLNL TELAALRPDLGKLKKILYFHENQLIYPVKKCQERDFQYGYNQILSCLVADVVVFNSVFNMESFLTSMGKF MKLIPDHRPKDLESIIRPKCQVIYFPIRFPDVSRFMPKHKTTHLKKMLGLKGNGGAVLSMALPFQPEQRD SEDLLKNFNSECDTHCGLDTARQEYLGNSLRQESDLKKSTSSDNSSSHHGENKQNLTVDPCDILGGVDNQ QRLLHIVWPHRWEHDKDPESFFKVLMHLKDLGLNFHVSVLGETFTDVPGWKLCTVGVTHFVLKIWFIPKY FQLNICILHLNSFQKGSRISARDQIL
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