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Report for CCDS91972.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91972.1 Public Homo sapiens 15 OTUD7A 24 110 108 CCDS HistoryNCBI Gene:161725Re-query CCDS DB by CCDS ID:91972.1Re-query CCDS DB by GeneID:161725See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91972.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307050.6 ENSP00000305926.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307050.6Link to Ensembl Protein Viewer:ENSP00000305926.5Re-query CCDS DB by Nucleotide ID:ENST00000307050Re-query CCDS DB by Protein ID:ENSP00000305926
Original member Current member NCBI NM_001382637.1 NP_001369566.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382637.1Link to Protein Sequence:NP_001369566.1Re-query CCDS DB by Nucleotide ID:NM_001382637Re-query CCDS DB by Protein ID:NP_001369566Link to BLAST:NP_001369566.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001369566.1 933 Q8TE49-2 933 100% 0 0

Chromosomal Locations for CCDS 91972.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 31483294 31484724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31487194 31487278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31487452 31487566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31501690 31501839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31503691 31503818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31526349 31526461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31527181 31527308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31530707 31530808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31558969 31559187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31570018 31570197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31655096 31655246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2802 nt):
ATGGTTTCTAGTGTGCTTCCAAACCCCACCTCGGCTGAGTGTTGGGCAGCACTTCTACATGATCCTATGA
CTCTTGATATGGACGCAGTCCTGTCAGACTTTGTTCGGTCCACGGGGGCAGAACCTGGTCTGGCCAGAGA
CCTGCTGGAAGGCAAAAACTGGGACCTGACAGCCGCTCTGAGCGACTATGAGCAGCTCCGCCAGGTGCAC
ACAGCCAATCTGCCACATGTGTTCAATGAAGGGCGGGGTCCCAAGCAGCCAGAGCGAGAGCCACAGCCCG
GGCACAAGGTGGAGCGACCCTGCCTGCAGAGGCAGGACGACATTGCCCAAGAAAAGCGGCTTTCCCGGGG
GATTTCCCACGCCAGCTCAGCCATCGTCTCCCTGGCCCGGTCCCACGTGGCAAGTGAATGCAACAACGAG
CAGTTCCCCCTGGAGATGCCAATCTACACATTCCAGTTGCCAGACCTGAGCGTGTACAGCGAGGATTTCA
GGAGCTTCATCGAGCGGGACTTGATCGAGCAGGCAACAATGGTGGCTTTGGAGCAGGCAGGTCGCCTGAA
CTGGTGGTCCACTGTGTGCACGAGCTGTAAACGGCTTCTTCCTCTGGCCACAACAGGGGATGGGAACTGC
CTTTTACATGCTGCTTCACTGGGAATGTGGGGGTTTCACGACCGGGACCTGGTGTTACGGAAAGCTCTCT
ATACCATGATGAGGACGGGAGCTGAGAGGGAAGCCCTGAAGCGGAGGTGGAGGTGGCAGCAGACGCAGCA
GAATAAGGAGTCAGGGCTGGTGTACACAGAGGAGGAGTGGGAGCGGGAGTGGACGGAGCTGCTGAAGCTG
GCCTCCAGCGAGCCGCGCACACACTTCAGCAAGAATGGCGGCACGGGCGGGGGTGTGGACAACTCTGAGG
ACCCCGTGTACGAGAGCCTGGAAGAGTTCCACGTTTTTGTCCTAGCCCATATATTAAGAAGGCCCATCGT
TGTTGTGGCAGATACAATGTTAAGAGACTCAGGTGGAGAAGCGTTCGCACCCATCCCATTCGGAGGGATC
TACCTGCCCTTGGAGGTCCCTCCCAACAGATGCCACTGCTCGCCTCTGGTTCTGGCCTATGATCAAGCCC
ATTTCTCTGCCCTTGTGTCCATGGAACAGAGAGACCAGCAAAGAGAACAAGCCGTGATCCCCCTGACGGA
TTCTGAGCACAAGCTGCTGCCTCTGCACTTTGCAGTGGACCCTGGCAAGGACTGGGAGTGGGGGAAAGAC
GACAACGATAACGCCCGGCTGGCCCACCTTATCCTGTCGCTAGAAGCCAAGCTGAACCTTCTGCACAGCT
ACATGAACGTGACGTGGATCCGGATCCCCTCCGAGACACGGGCGCCCCTGGCACAGCCGGAGTCTCCCAC
GGCCTCGGCAGGGGAGGACGTGCAGTCCCTGGCCGACTCGCTGGACTCGGACCGCGATTCGGTGTGCAGC
AATTCTAACAGCAATAACGGCAAGAACGGCAAGGACAAGGAGAAGGAGAAGCAGCGCAAGGAGAAGGACA
AGACGCGCGCCGACTCCGTGGCCAACAAGCTGGGCAGCTTCAGCAAGACGCTGGGCATCAAGCTGAAGAA
AAACATGGGCGGCCTCGGCGGCCTGGTGCACGGCAAGATGGGCCGCGCCAACTCCGCCAATGGCAAGAAC
GGGGACTCGGCCGAGCGGGGCAAGGAGAAGAAGGCCAAGTCGCGCAAGGGCAGCAAGGAGGAGTCTGGTG
CGTCGGCCAGCACGTCGCCGTCGGAAAAGACCACGCCGTCGCCCACAGACAAGGCAGCGGGCGCGTCGCC
GGCGGAGAAGGGCGGTGGGCCGCGGGGCGACGCCTGGAAGTACAGCACGGATGTGAAGCTGAGCCTCAAC
ATCCTGCGCGCCGCCATGCAGGGGGAGCGCAAGTTCATCTTCGCCGGCCTGCTGCTCACCAGCCACCGGC
ACCAGTTCCACGAGGAGATGATCGGCTACTACCTGACGAGCGCGCAGGAGCGCTTCAGCGCCGAGCAGGA
GCAGCGGCGCCGCGACGCCGCTACTGCGGCCGCCGCTGCCGCCGCCGCCGCCGCCGCCACGGCCAAGCGG
CCGCCGCGCAGACCGGAGACGGAGGGCGTGCCGGTCCCGGAGCGCGCCTCTCCGGGCCCACCCACGCAGC
TGGTGCTCAAGCTCAAGGAGCGGCCGAGCCCCGGGCCCGCGGCAGGGCGTGCGGCGCGGGCGGCGGCGGG
CGGCACGGCCTCCCCGGGGGGAGGCGCGCGGCGTGCGAGCGCCAGCGGACCAGTGCCTGGCCGCAGCCCC
CCGGCGCCAGCGCGCCAGAGCGTCATCCACGTGCAGGCGTCGGGCGCGCGGGACGAGGCGTGCGCGCCGG
CCGTGGGGGCGCTGCGGCCGTGCGCCACGTACCCGCAGCAGAACCGCTCGCTGTCGTCGCAGAGCTACAG
CCCGGCGCGCGCCGCCGCCCTGCGCACCGTCAACACGGTCGAGTCGCTGGCGCGCGCGGTGCCCGGGGCC
CTACCGGGCGCGGCGGGGACGGCGGGGGCGGCCGAGCACAAGTCGCAGACCTACACCAACGGCTTCGGCG
CCCTGCGCGACGGCCTGGAGTTCGCCGACGCCGACGCGCCGACCGCGCGCTCGAACGGTGAGTGCGGCCG
TGGCGGCCCGGGGCCGGTGCAGCGGCGCTGCCAGCGCGAGAACTGTGCGTTCTACGGGCGCGCCGAGACC
GAGCACTACTGCTCCTACTGCTACCGCGAGGAGCTGCGGCGGCGGCGCGAGGCGCGCGGGGCCCGGCCCT
GA

Translation (933 aa):
MVSSVLPNPTSAECWAALLHDPMTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLTAALSDYEQLRQVH
TANLPHVFNEGRGPKQPEREPQPGHKVERPCLQRQDDIAQEKRLSRGISHASSAIVSLARSHVASECNNE
QFPLEMPIYTFQLPDLSVYSEDFRSFIERDLIEQATMVALEQAGRLNWWSTVCTSCKRLLPLATTGDGNC
LLHAASLGMWGFHDRDLVLRKALYTMMRTGAEREALKRRWRWQQTQQNKESGLVYTEEEWEREWTELLKL
ASSEPRTHFSKNGGTGGGVDNSEDPVYESLEEFHVFVLAHILRRPIVVVADTMLRDSGGEAFAPIPFGGI
YLPLEVPPNRCHCSPLVLAYDQAHFSALVSMEQRDQQREQAVIPLTDSEHKLLPLHFAVDPGKDWEWGKD
DNDNARLAHLILSLEAKLNLLHSYMNVTWIRIPSETRAPLAQPESPTASAGEDVQSLADSLDSDRDSVCS
NSNSNNGKNGKDKEKEKQRKEKDKTRADSVANKLGSFSKTLGIKLKKNMGGLGGLVHGKMGRANSANGKN
GDSAERGKEKKAKSRKGSKEESGASASTSPSEKTTPSPTDKAAGASPAEKGGGPRGDAWKYSTDVKLSLN
ILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTSAQERFSAEQEQRRRDAATAAAAAAAAAAATAKR
PPRRPETEGVPVPERASPGPPTQLVLKLKERPSPGPAAGRAARAAAGGTASPGGGARRASASGPVPGRSP
PAPARQSVIHVQASGARDEACAPAVGALRPCATYPQQNRSLSSQSYSPARAAALRTVNTVESLARAVPGA
LPGAAGTAGAAEHKSQTYTNGFGALRDGLEFADADAPTARSNGECGRGGPGPVQRRCQRENCAFYGRAET
EHYCSYCYREELRRRREARGARP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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