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Report for CCDS93119.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93119.1 Public Homo sapiens 22 TBX1 24 110 108 CCDS HistoryNCBI Gene:6899Re-query CCDS DB by CCDS ID:93119.1Re-query CCDS DB by GeneID:6899See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93119.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000649276.2 ENSP00000497003.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000649276.2Link to Ensembl Protein Viewer:ENSP00000497003.1Re-query CCDS DB by Nucleotide ID:ENST00000649276Re-query CCDS DB by Protein ID:ENSP00000497003
Original member Current member NCBI NM_001379200.1 NP_001366129.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001379200.1Link to Protein Sequence:NP_001366129.1Re-query CCDS DB by Nucleotide ID:NM_001379200Re-query CCDS DB by Protein ID:NP_001366129Link to BLAST:NP_001366129.1

Chromosomal Locations for CCDS 93119.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 19760844 19761280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19763241 19763342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19764155 19764326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19764958 19765113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19765758 19765825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19765902 19766002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 19766389 19766867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGATCTCCGCCGTGTCCAGCCCGTGGCTCACGCAGCTCTCGCATTTCTGCGACGTTGCAGCCTTCACGG
CCAGCAGCCTGAGCAGCCTGGGGGCCGCGGGGGGCTTCCCGGGCGCCGCGTCGCCCGGCGCCGACCCGTA
CGGCCCGCGCGAGCCCCCGCCGCCGCCGCCGCGCTACGACCCGTGCGCCGCCGCCGCCCCCGGCGCCCCG
GGCCCGCCGCCGCCGCCGCACGCCTACCCGTTTGCGCCGGCCGCCGGGGCCGCCACCAGCGCCGCCGCCG
AGCCCGAGGGCCCCGGGGCCAGCTGCGCGGCCGCAGCCAAGGCGCCGGTGAAGAAGAACGCGAAGGTGGC
CGGTGTGAGCGTGCAGCTAGAGATGAAGGCGCTGTGGGACGAGTTCAACCAGCTGGGCACCGAGATGATC
GTCACCAAGGCCGGCAGGCGGATGTTTCCCACCTTCCAAGTGAAGCTCTTCGGCATGGATCCCATGGCCG
ACTATATGCTGCTCATGGACTTCGTGCCGGTGGACGATAAGCGCTACCGGTACGCCTTCCACAGCTCCTC
CTGGCTGGTGGCGGGGAAGGCCGACCCTGCCACGCCAGGCCGCGTGCACTACCACCCGGACTCGCCTGCC
AAGGGCGCGCAGTGGATGAAGCAAATCGTGTCCTTCGACAAGCTCAAGCTGACCAACAACCTACTGGACG
ACAACGGCCACATTATTCTGAATTCCATGCACAGATACCAGCCCCGCTTCCACGTGGTCTATGTGGACCC
ACGCAAAGATAGCGAGAAATATGCCGAGGAGAACTTCAAAACCTTTGTGTTCGAGGAGACACGATTCACC
GCGGTCACTGCCTACCAGAACCATCGGATCACGCAGCTCAAGATTGCCAGCAATCCCTTCGCGAAAGGCT
TCCGGGACTGTGACCCTGAGGACTGGCCCCGGAACCACCGGCCCGGCGCACTGCCGCTCATGAGCGCCTT
CGCGCGCTCGCGGAACCCCGTGGCTTCCCCGACGCAGCCCAGCGGCACGGAGAAAGACGCGGCTGAGGCC
CGGCGAGAATTCCAGCGCGACGCGGGCGGGCCAGCAGTGCTCGGGGACCCGGCGCATCCTCCGCAGCTGC
TGGCCCGGGTGCTAAGCCCCTCGCTGCCCGGGGCCGGCGGCGCCGGCGGCTTAGTCCCGCTGCCCGGCGC
GCCCGGAGGCCGGCCCAGTCCCCCGAACCCCGAGCTGCGCCTGGAGGCGCCCGGCGCATCGGAGCCGCTG
CACCACCACCCCTACAAATATCCGGCCGCCGCCTACGACCACTATCTCGGGGCCAAGAGCCGGCCGGCGC
CCTACCCGCTGCCCGGCCTGCGTGGCCACGGCTACCACCCGCACGCGCATCCGCACCACCACCACCACCC
CGTGAGTCCAGCCGCCGCGGCCGCCGCCGCCGCTGCCGCAGCTGCCGCGGCCGCCAACATGTACTCGTCG
GCCGGAGCCGCGCCGCCCGGCTCCTACGACTATTGCCCCAGATAA

Translation (504 aa):
MISAVSSPWLTQLSHFCDVAAFTASSLSSLGAAGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAP
GPPPPPHAYPFAPAAGAATSAAAEPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWDEFNQLGTEMI
VTKAGRRMFPTFQVKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPA
KGAQWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFT
AVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHRPGALPLMSAFARSRNPVASPTQPSGTEKDAAEA
RREFQRDAGGPAVLGDPAHPPQLLARVLSPSLPGAGGAGGLVPLPGAPGGRPSPPNPELRLEAPGASEPL
HHHPYKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAAANMYSS
AGAAPPGSYDYCPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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