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Report for CCDS48627.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48627.1 Public Mus musculus 10 Dazap1 23 108 98 CCDS HistoryNCBI Gene:70248Re-query CCDS DB by CCDS ID:48627.1Re-query CCDS DB by GeneID:70248See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48627.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105361.9 ENSMUSP00000101000.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105361.9Link to Ensembl Protein Viewer:ENSMUSP00000101000.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000105361Re-query CCDS DB by Protein ID:ENSMUSP00000101000
Original member NCBI NM_001122605.1 NP_001116077.1 Updated not alive Link to Nucleotide Sequence:NM_001122605.1Link to Protein Sequence:NP_001116077.1Re-query CCDS DB by Nucleotide ID:NM_001122605Re-query CCDS DB by Protein ID:NP_001116077
Current member NCBI NM_001122605.2 NP_001116077.1 Accepted alive Link to Nucleotide Sequence:NM_001122605.2Link to Protein Sequence:NP_001116077.1Re-query CCDS DB by Nucleotide ID:NM_001122605Re-query CCDS DB by Protein ID:NP_001116077Link to BLAST:NP_001116077.1

Chromosomal Locations for CCDS 48627.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80265150 80265178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80274007 80274047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80274448 80274614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80274804 80274869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80277575 80277682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80278233 80278281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80280929 80281011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80283024 80283177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80284230 80284259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80284409 80284549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80285250 80285426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80287536 80287711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1221 nt):
ATGAACAGCGCGGGCGCCGACGAAATCGGGAAGCTCTTTGTGGGCGGCCTGGACTGGAGTACCACTCAAG
AGACTCTACGCAGCTACTTTTCCCAGTATGGTGAGGTTGTGGATTGTGTCATCATGAAAGATAAAACCAC
CAACCAGTCTAGAGGCTTTGGATTTGTCAAGTTTAAAGACCCCAATTGTGTGGGGACAGTGCTGGCCAGC
AGACCACACACCCTAGATGGCCGAAATATCGACCCGAAGCCGTGCACACCTCGGGGGATGCAGCCAGAGC
GAACACGGCCCAAGGAAGGCTGGAAAGGACCCAGGAGCGACAGCAGCAAATCCAACAAGATCTTTGTCGG
GGGCATTCCCCACAACTGCGGGGAGACGGAGCTCAGGGAGTACTTCAAGAAGTTTGGAGTGGTCACAGAG
GTGGTTATGATCTATGATGCGGAGAAGCAGCGGCCTCGAGGTTTTGGATTTATTACTTTCGAGGACGAAC
AATCAGTGGACCAGGCTGTCAACATGCATTTTCACGACATCATGGGCAAAAAAGTGGAGGTTAAACGGGC
TGAACCACGGGACAGCAAGAATCAAGCTCCAGGACAGCCAGGAGCCAGCCAGTGGGGCAGCCGCGTGGCG
CCCAGTGCAGCCAACGGCTGGGCAGGCCAGCCCCCGCCCACGTGGCAACAAGGATATGGCCCACAAGGAA
TGTGGGTGCCAGCAGGACAGGCCATTGGTGGCTATGGCCCACCCCCTGCGGGCAGAGGAGCCCCGCCCCC
GCCCCCACCCTTCACCTCCTACATTGTATCCACACCGCCTGGAGGCTTCCCCCCACCACAGGGCTTCCCA
CAGGGCTATGGCGCCCCACCACAGTTCAGTTTTGGCTACGGTCCTCCTCCCCCACCCCCTGATCAGTTTG
CCCCTCCAGGGGTCCCTCCTCCACCTGCCACCCCAGGGGCTGCCCCGCTGGCCTTCCCACCACCTCCGTC
TCAGGCTGCCCCAGACATGAGCAAACCCCCAACAGCCCAGCCGGACTTCCCCTATGGTCAATATGCAGGT
TACGGGCAGGACTTGAGTGGCTTCGGCCAGGGCTTCTCGGACCCCAGCCAGCAGCCGCCCTCCTATGGGG
GCCCCTCTGTACCAGGTTCGGGGGGTCCCCCCGCTGGCGGCAGTGGCTTCGGACGCGGGCAGAACCACAA
CGTGCAGGGCTTCCATCCCTACCGGCGCTAG

Translation (406 aa):
MNSAGADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS
RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTE
VVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQPGASQWGSRVA
PSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFP
QGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAG
YGQDLSGFGQGFSDPSQQPPSYGGPSVPGSGGPPAGGSGFGRGQNHNVQGFHPYRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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