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Report for CCDS33892.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33892.1 Public Homo sapiens 3 SLC7A14 24 110 108 CCDS HistoryNCBI Gene:57709Re-query CCDS DB by CCDS ID:33892.1Re-query CCDS DB by GeneID:57709See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33892.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000231706.6 ENSP00000231706.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000231706.6Link to Ensembl Protein Viewer:ENSP00000231706.4Re-query CCDS DB by Nucleotide ID:ENST00000231706Re-query CCDS DB by Protein ID:ENSP00000231706
Original member Current member NCBI NM_020949.3 NP_066000.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020949.3Link to Protein Sequence:NP_066000.2Re-query CCDS DB by Nucleotide ID:NM_020949Re-query CCDS DB by Protein ID:NP_066000Link to BLAST:NP_066000.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066000.2 771 Q8TBB6 771 100% 0 0

Chromosomal Locations for CCDS 33892.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 170467055 170467377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 170480289 170481166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 170483314 170483522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 170486222 170486368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 170498667 170498884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 170501109 170501345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 170526633 170526936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2316 nt):
ATGAGTGGCTTCTTCACCTCGCTGGACCCCCGGCGGGTGCAGTGGGGAGCTGCCTGGTATGCAATGCACT
CCAGGATCCTACGCACCAAACCAGTGGAGTCCATGCTAGAGGGAACTGGGACCACCACGGCACATGGAAC
TAAGCTAGCCCAGGTACTCACCACAGTGGACCTCATCTCTCTTGGCGTTGGCAGCTGTGTGGGCACTGGC
ATGTATGTGGTCTCTGGCCTGGTGGCCAAGGAAATGGCAGGACCTGGTGTCATTGTGTCCTTCATCATTG
CAGCCGTCGCATCCATATTATCAGGCGTCTGCTATGCAGAGTTTGGAGTTCGAGTCCCCAAGACCACAGG
ATCTGCCTACACCTACAGCTATGTCACTGTTGGGGAATTTGTGGCATTTTTCATTGGCTGGAACCTGATC
CTGGAGTACCTGATTGGCACTGCGGCCGGAGCCAGTGCTCTGAGCAGCATGTTTGACTCACTAGCCAACC
ACACCATCAGCCGCTGGATGGCGGACAGCGTGGGAACCCTCAATGGCCTGGGGAAAGGTGAAGAATCATA
CCCAGACCTTCTGGCTCTGTTGATCGCGGTCATCGTGACCATCATTGTTGCTCTGGGGGTGAAGAATTCC
ATAGGCTTCAACAATGTTCTCAATGTGCTGAACCTGGCAGTATGGGTGTTCATCATGATCGCAGGCCTCT
TCTTCATCAATGGGAAATACTGGGCGGAGGGCCAGTTCTTGCCCCACGGCTGGTCAGGGGTGCTGCAAGG
AGCAGCAACATGCTTCTACGCTTTCATTGGCTTTGACATCATCGCCACCACTGGAGAGGAAGCCAAGAAT
CCCAACACGTCCATCCCTTATGCTATCACTGCCTCCCTGGTCATCTGCCTGACAGCATATGTGTCTGTGA
GCGTGATCTTAACTCTGATGGTGCCATATTATACCATTGACACGGAATCCCCACTCATGGAGATGTTTGT
GGCTCATGGGTTCTATGCTGCCAAATTCGTAGTGGCCATTGGGTCGGTTGCAGGACTGACAGTCAGCTTG
CTGGGGTCCCTCTTCCCGATGCCGAGGGTCATTTATGCCATGGCTGGTGACGGGCTCCTTTTCAGGTTCC
TGGCTCACGTCAGCTCCTACACAGAGACACCAGTGGTGGCCTGCATCGTGTCGGGGTTCCTGGCAGCGCT
CCTCGCACTGTTGGTCAGCTTGAGAGACCTGATAGAGATGATGTCTATCGGCACGCTCCTGGCCTACACC
TTGGTCTCTGTCTGTGTCTTGCTCCTTCGATACCAACCTGAGAGTGACATTGATGGTTTTGTCAAGTTCT
TGTCTGAGGAGCACACCAAGAAGAAGGAGGGCATTCTGGCTGACTGTGAGAAGGAAGCTTGTTCTCCTGT
GAGTGAGGGGGATGAGTTTTCTGGCCCAGCCACCAACACATGTGGGGCCAAGAACTTACCATCCTTGGGA
GACAATGAGATGCTCATAGGGAAATCAGACAAGTCAACCTACAACGTCAACCACCCCAATTACGGCACCG
TGGACATGACCACAGGCATAGAAGCTGATGAATCCGAAAATATTTATCTCATCAAGTTAAAGAAGCTGAT
TGGGCCTCATTATTACACCATGAGAATCCGGCTGGGCCTTCCAGGCAAAATGGACCGGCCCACAGCAGCG
ACGGGGCACACGGTGACCATCTGCGTGCTCCTGCTCTTCATCCTCATGTTCATCTTCTGCTCCTTCATCA
TCTTTGGTTCTGACTACATCTCAGAGCAGAGCTGGTGGGCCATCCTTCTGGTTGTTCTGATGGTGCTGCT
GATCAGCACCCTGGTGTTTGTGATCCTGCAGCAGCCAGAGAACCCCAAGAAGCTGCCCTACATGGCCCCT
TGCCTCCCCTTTGTGCCTGCCTTTGCCATGCTGGTGAACATCTATCTCATGCTAAAGCTCTCCACCATCA
CATGGATCCGGTTTGCGGTCTGGTGCTTTGTGGGTCTGCTCATTTATTTTGGATATGGCATCTGGAACAG
CACCCTGGAAATCAGCGCTCGAGAAGAGGCCCTGCACCAAAGCACGTACCAACGCTACGACGTGGATGAC
CCCTTCTCAGTGGAGGAGGGTTTCTCCTACGCCACAGAGGGCGAGAGCCAGGAGGACTGGGGCGGGCCCA
CTGAAGACAAAGGCTTCTATTACCAACAGATGTCAGATGCGAAGGCAAACGGCCGGACAAGTAGCAAAGC
GAAGAGCAAAAGCAAACACAAACAGAACTCAGAGGCCCTGATTGCAAATGATGAGTTAGATTACTCTCCA
GAGTAG

Translation (771 aa):
MSGFFTSLDPRRVQWGAAWYAMHSRILRTKPVESMLEGTGTTTAHGTKLAQVLTTVDLISLGVGSCVGTG
MYVVSGLVAKEMAGPGVIVSFIIAAVASILSGVCYAEFGVRVPKTTGSAYTYSYVTVGEFVAFFIGWNLI
LEYLIGTAAGASALSSMFDSLANHTISRWMADSVGTLNGLGKGEESYPDLLALLIAVIVTIIVALGVKNS
IGFNNVLNVLNLAVWVFIMIAGLFFINGKYWAEGQFLPHGWSGVLQGAATCFYAFIGFDIIATTGEEAKN
PNTSIPYAITASLVICLTAYVSVSVILTLMVPYYTIDTESPLMEMFVAHGFYAAKFVVAIGSVAGLTVSL
LGSLFPMPRVIYAMAGDGLLFRFLAHVSSYTETPVVACIVSGFLAALLALLVSLRDLIEMMSIGTLLAYT
LVSVCVLLLRYQPESDIDGFVKFLSEEHTKKKEGILADCEKEACSPVSEGDEFSGPATNTCGAKNLPSLG
DNEMLIGKSDKSTYNVNHPNYGTVDMTTGIEADESENIYLIKLKKLIGPHYYTMRIRLGLPGKMDRPTAA
TGHTVTICVLLLFILMFIFCSFIIFGSDYISEQSWWAILLVVLMVLLISTLVFVILQQPENPKKLPYMAP
CLPFVPAFAMLVNIYLMLKLSTITWIRFAVWCFVGLLIYFGYGIWNSTLEISAREEALHQSTYQRYDVDD
PFSVEEGFSYATEGESQEDWGGPTEDKGFYYQQMSDAKANGRTSSKAKSKSKHKQNSEALIANDELDYSP
E


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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