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Report for CCDS23707.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23707.1 Public Mus musculus 10 Nmbr 23 108 98 CCDS HistoryNCBI Gene:18101Re-query CCDS DB by CCDS ID:23707.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23707.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020015.9 ENSMUSP00000020015.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020015.9Link to Ensembl Protein Viewer:ENSMUSP00000020015.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000020015Re-query CCDS DB by Protein ID:ENSMUSP00000020015
Original member Current member NCBI NM_008703.3 NP_032729.1 Accepted alive Link to Nucleotide Sequence:NM_008703.3Link to Protein Sequence:NP_032729.1Re-query CCDS DB by Nucleotide ID:NM_008703Re-query CCDS DB by Protein ID:NP_032729Link to BLAST:NP_032729.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032729.1 390 O54799 390 100% 0 0

Chromosomal Locations for CCDS 23707.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 14760289 14760710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14766677 14767025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14770155 14770556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGCCCCCCAGGTCTCTCTCCAACCTCTCCTTTCCCACAGAGGCGAATGAGAGCGAGCTGGTACCCGAGG
TGTGGGAAAAGGATTTCCTGCCCGACTCAGATGGGACCACCGCGGAGTTGGTGATCCGCTGTGTGATACC
ATCCCTCTACCTAATCATCATCTCGGTGGGTTTGCTGGGCAACATCATGCTGGTGAAGATATTCCTCACC
AACAGCGCCATGCGGAATGTCCCTAACATCTTCATCTCTAACCTGGCGGCTGGGGACCTGCTGCTGCTGC
TGACCTGCGTTCCAGTGGACGCCTCCCGTTACTTCTTTGATGAATGGGTGTTCGGCAAGCTGGGCTGCAA
ACTCATCCCGGCCATCCAGCTCACCTCGGTGGGGGTTTCTGTGTTCACTCTCACTGCTCTCAGCGCTGAC
AGGTACAGAGCTATCGTGAACCCCATGGACATGCAGACGTCCGGTGTGTTGCTGTGGACCAGTTTGAAGG
CAGTGGGCATCTGGGTGGTCTCTGTGTTGTTGGCGGTCCCTGAAGCTGTGTTTTCAGAAGTAGCACGCAT
TGGTAGCTTGGATAACAGCAGTTTCACAGCATGCATACCCTACCCACAAACAGATGAGTTACATCCAAAG
ATTCATTCAGTGCTCATTTTTCTTGTCTATTTCCTCATACCCCTTGTTATCATCAGCATTTATTATTATC
ATATTGCAAAGACTTTAATTAAAAGTGCACACAATCTTCCTGGAGAATACAATGAACATACCAAAAAGCA
GATGGAGACACGGAAACGCCTGGCTAAGATTGTTCTGGTCTTTGTGGGCTGCTTTGTCTTCTGCTGGTTT
CCCAACCACGTCCTCTACTTGTATAGGTCTTTCAACTACAAGGAGATAGATCCTTCTCTCGGGCACATGA
TCGTCACCTTAGTGGCCCGGGTTCTGAGTTTCAGCAATTCCTGTGTCAATCCCTTTGCTCTTTACCTGCT
CAGCGAAAGCTTTAGGAAGCACTTCAACAGCCAGCTCTGTTGTGGGCGGAAGTCCTATCCCGAGAGGTCC
ACCAGCTACCTCCTCAGCTCGTCAGCAGTAAGAATGACTTCTTTGAAAAGCAATACAAAGAATGTGGTGA
CCAATTCTGTCCTGCTCAATGGACATAGCACAAAGCAAGAAATAGCACTGTGA

Translation (390 aa):
MPPRSLSNLSFPTEANESELVPEVWEKDFLPDSDGTTAELVIRCVIPSLYLIIISVGLLGNIMLVKIFLT
NSAMRNVPNIFISNLAAGDLLLLLTCVPVDASRYFFDEWVFGKLGCKLIPAIQLTSVGVSVFTLTALSAD
RYRAIVNPMDMQTSGVLLWTSLKAVGIWVVSVLLAVPEAVFSEVARIGSLDNSSFTACIPYPQTDELHPK
IHSVLIFLVYFLIPLVIISIYYYHIAKTLIKSAHNLPGEYNEHTKKQMETRKRLAKIVLVFVGCFVFCWF
PNHVLYLYRSFNYKEIDPSLGHMIVTLVARVLSFSNSCVNPFALYLLSESFRKHFNSQLCCGRKSYPERS
TSYLLSSSAVRMTSLKSNTKNVVTNSVLLNGHSTKQEIAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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