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Report for CCDS4146.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4146.2 Public Homo sapiens 5 ADAMTS19 24 110 108 CCDS HistoryNCBI Gene:171019Re-query CCDS DB by CCDS ID:4146.2Re-query CCDS DB by GeneID:171019See the combined annotation on chromosome 5 in Sequence Viewer

Public Note for CCDS 4146.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 4146.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274487.9 ENSP00000274487.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000274487.9Link to Ensembl Protein Viewer:ENSP00000274487.5Re-query CCDS DB by Nucleotide ID:ENST00000274487Re-query CCDS DB by Protein ID:ENSP00000274487
Original member Current member NCBI NM_133638.6 NP_598377.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133638.6Link to Protein Sequence:NP_598377.4Re-query CCDS DB by Nucleotide ID:NM_133638Re-query CCDS DB by Protein ID:NP_598377Link to BLAST:NP_598377.4

Chromosomal Locations for CCDS 4146.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 129460392 129460482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129461102 129461757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129509077 129509242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129526284 129526456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129527748 129527831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129528520 129528677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129551864 129551907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129596559 129596664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129620618 129620758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129622198 129622348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129641859 129641960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129647765 129647895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129648798 129648970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129654306 129654433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129658617 129658737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129665499 129665579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129679764 129679921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129684120 129684273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129694720 129694855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129701388 129701592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129704239 129704391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129734932 129735109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 129737067 129737218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3642 nt):
ATGGGGAAGAACCGCGAGATGCGCCTGACTCACATCTGCTGCTGCTGCCTCCTTTACCAGCTGGGGTTCC
TGTCGAATGGGATCGTTTCAGAGCTGCAGTTCGCCCCCGACCGCGAGGAGTGGGAAGTCGTGTTTCCTGC
GCTCTGGCGCCGGGAGCCGGTGGACCCGGCTGGCGGCAGCGGGGGCAGCGCGGACCCGGGCTGGGTGCGC
GGCGTTGGGGGCGGCGGAAGCGCCCGGGCGCAGGCTGCCGGCAGCTCACGCGAGGTGCGCTCTGTGGCTC
CGGTGCCTTTGGAGGAGCCCGTGGAGGGCCGATCAGAGTCCCGGCTCCGGCCCCCGCCGCCGTCGGAGGG
TGAGGAGGACGAGGAGCTCGAGTCGCAGGAGCTGCCGCGGGGATCCAGCGGGGCTGCCGCCTTGTCCCCG
GGCGCCCCGGCCTCGTGGCAGCCGCCGCCTCCCCCGCAGCCGCCCCCGTCCCCGCCCCCGGCCCAGCATG
CCGAGCCGGATGGCGACGAAGTGTTGCTGCGGATCCCGGCCTTCTCTCGGGACCTGTACCTGCTGCTCCG
GAGAGACGGCCGCTTCCTGGCGCCGCGCTTCGCAGTGGAACAGCGGCCAAATCCCGGCCCCGGCCCCACG
GGGGCAGCATCCGCCCCGCAACCTCCCGCGCCACCAGACGCAGGCTGCTTCTACACCGGAGCTGTGCTGC
GGCACCCTGGCTCGCTGGCTTCTTTCAGCACCTGTGGAGGTGGCCTGATGGGATTTATACAGCTCAATGA
GGACTTCATATTTATTGAGCCACTCAATGATACAATGGCCATAACAGGTCACCCACACCGTGTATATAGG
CAGAAAAGGTCCATGGAGGAAAAGGTCACAGAGAAGTCAGCTCTTCACAGTCATTACTGTGGTATCATTT
CAGATAAAGGAAGACCTAGGTCTAGAAAAATAGCAGAAAGTGGAAGAGGGAAACGATATTCATACAAATT
ACCTCAAGAATACAACATAGAGACTGTAGTGGTTGCAGACCCAGCAATGGTTTCCTATCATGGAGCAGAT
GCAGCCAGGAGATTCATTCTAACCATCTTAAATATGGTATTTAACCTTTTCCAACACAAGAGTCTGAGTG
TGCAGGTCAATCTTCGTGTGATAAAGCTTATTCTGCTCCATGAAACTCCACCAGAACTATATATTGGGCA
TCATGGAGAAAAAATGCTAGAGAGTTTTTGTAAGTGGCAACATGAAGAATTTGGCAAAAAGAATGATATA
CATTTAGAGATGTCAACAAACTGGGGGGAAGACATGACTTCAGTGGATGCAGCTATACTTATAACAAGGA
AAGATTTCTGTGTGCACAAAGATGAACCATGTGATACTGTTGGTATAGCTTACTTGAGTGGAATGTGTAG
TGAAAAGAGAAAATGTATTATTGCTGAAGACAATGGCTTGAATCTTGCTTTTACAATTGCTCATGAAATG
GGTCACAACATGGGCATTAACCATGACAATGACCACCCATCGTGTGCTGATGGTCTTCATATCATGTCTG
GTGAATGGATTAAAGGACAGAATCTTGGTGACGTTTCATGGTCTCGATGTAGCAAGGAAGATTTGGAAAG
ATTTCTCAGGTCAAAGGCCAGTAACTGCTTGCTACAAACAAATCCGCAGAGTGTCAATTCTGTGATGGTT
CCCTCCAAGCTGCCAGGGATGACATACACTGCTGATGAACAATGCCAGATCCTTTTTGGGCCATTGGCTT
CTTTTTGTCAGGAGATGCAGCATGTTATTTGCACAGGATTATGGTGCAAGGTAGAAGGTGAGAAAGAATG
CAGAACCAAGCTAGACCCACCAATGGATGGAACTGACTGTGACCTTGGTAAGTGGTGTAAGGCTGGAGAA
TGTACCAGCAGGACCTCAGCACCTGAACATCTGGCCGGAGAGTGGAGCCTGTGGAGTCCTTGTAGCCGAA
CCTGCAGTGCTGGGATCAGCAGTCGAGAGCGCAAATGTCCTGGGCTAGATTCTGAAGCAAGGGATTGTAA
TGGTCCCAGAAAACAATACAGAATATGTGAGAATCCACCTTGTCCTGCAGGTTTGCCTGGATTCAGAGAC
TGGCAATGTCAGGCTTATAGTGTTAGAACTTCCTCCCCAAAGCATATACTTCAGTGGCAAGCTGTCCTGG
ATGAAGAAAAACCATGTGCCTTGTTTTGCTCTCCTGTTGGAAAAGAACAGCCTATTCTTCTATCAGAAAA
AGTGATGGATGGAACTTCTTGTGGCTATCAGGGATTAGATATCTGTGCAAATGGCAGGTGCCAGAAAGTT
GGCTGTGATGGTTTATTAGGGTCTCTTGCAAGAGAAGATCATTGTGGTGTATGCAATGGCAATGGAAAAT
CATGCAAGATCATTAAAGGGGATTTTAATCACACCAGAGGAGCAGGTTATGTAGAAGTGCTGGTGATACC
TGCTGGAGCAAGAAGAATCAAAGTTGTGGAGGAAAAGCCGGCACATAGCTATTTAGCTCTCCGAGATGCT
GGCAAACAGTCTATTAATAGTGACTGGAAGATTGAACACTCTGGAGCCTTCAATTTGGCTGGAACTACCG
TTCATTATGTAAGACGAGGCCTCTGGGAGAAGATCTCTGCCAAAGGTCCTACTACAGCACCTTTACATCT
TCTGGTGCTCCTGTTTCAGGATCAGAATTATGGTCTTCACTATGAATACACTATCCCATCAGACCCTCTT
CCAGAAAACCAGAGCTCTAAAGCACCTGAGCCCCTCTTCATGTGGACACACACAAGCTGGGAAGATTGCG
ATGCCACTTGTGGAGGAGGAGAAAGGAAGACAACAGTGTCCTGCACAAAAATCATGAGCAAAAATATCAG
CATTGTGGACAATGAGAAATGCAAATACTTAACCAAGCCAGAGCCACAGATTCGAAAGTGCAATGAGCAA
CCATGTCAAACAAGGTGGATGATGACAGAATGGACCCCTTGTTCACGAACTTGTGGAAAAGGAATGCAGA
GCAGACAAGTGGCCTGTACCCAACAACTGAGCAATGGAACACTGATTAGAGCCCGAGAGAGGGACTGCAT
TGGGCCCAAGCCCGCCTCTGCCCAGCGCTGTGAGGGCCAGGACTGCATGACCGTGTGGGAGGCGGGAGTG
TGGTCTGAGTGTTCAGTCAAGTGTGGCAAAGGCATACGTCATCGGACCGTTAGATGTACCAACCCAAGAA
AGAAGTGTGTCCTCTCTACCAGACCCAGGGAGGCTGAAGACTGTGAGGATTATTCAAAATGCTATGTGTG
GCGAATGGGTGACTGGTCTAAGTGCTCAATTACCTGTGGCAAAGGAATGCAGTCCCGTGTAATCCAATGC
ATGCATAAGATCACAGGAAGACATGGAAATGAATGTTTTTCCTCAGAAAAACCTGCAGCATACAGGCCAT
GCCATCTTCAACCCTGCAATGAGAAAATTAATGTAAATACCATAACATCACCCAGACTGGCTGCTCTGAC
TTTCAAGTGCCTGGGAGATCAGTGGCCAGTGTACTGCCGAGTGATACGTGAAAAGAACCTATGTCAGGAC
ATGCGGTGGTATCAGCGCTGCTGTGAAACATGCAGGGACTTCTATGCCCAAAAGCTGCAGCAGAAGAGTT
GA

Translation (1213 aa):
MGKNREMRLTHICCCCLLYQLGFLSNGIVSELQFAPDREEWEVVFPALWRREPVDPAGGSGGSADPGWVR
GVGGGGSARAQAAGSSREVRSVAPVPLEEPVEGRSESRLRPPPPSEGEEDEELESQELPRGSSGAAALSP
GAPASWQPPPPPQPPPSPPPAQHAEPDGDEVLLRIPAFSRDLYLLLRRDGRFLAPRFAVEQRPNPGPGPT
GAASAPQPPAPPDAGCFYTGAVLRHPGSLASFSTCGGGLMGFIQLNEDFIFIEPLNDTMAITGHPHRVYR
QKRSMEEKVTEKSALHSHYCGIISDKGRPRSRKIAESGRGKRYSYKLPQEYNIETVVVADPAMVSYHGAD
AARRFILTILNMVFNLFQHKSLSVQVNLRVIKLILLHETPPELYIGHHGEKMLESFCKWQHEEFGKKNDI
HLEMSTNWGEDMTSVDAAILITRKDFCVHKDEPCDTVGIAYLSGMCSEKRKCIIAEDNGLNLAFTIAHEM
GHNMGINHDNDHPSCADGLHIMSGEWIKGQNLGDVSWSRCSKEDLERFLRSKASNCLLQTNPQSVNSVMV
PSKLPGMTYTADEQCQILFGPLASFCQEMQHVICTGLWCKVEGEKECRTKLDPPMDGTDCDLGKWCKAGE
CTSRTSAPEHLAGEWSLWSPCSRTCSAGISSRERKCPGLDSEARDCNGPRKQYRICENPPCPAGLPGFRD
WQCQAYSVRTSSPKHILQWQAVLDEEKPCALFCSPVGKEQPILLSEKVMDGTSCGYQGLDICANGRCQKV
GCDGLLGSLAREDHCGVCNGNGKSCKIIKGDFNHTRGAGYVEVLVIPAGARRIKVVEEKPAHSYLALRDA
GKQSINSDWKIEHSGAFNLAGTTVHYVRRGLWEKISAKGPTTAPLHLLVLLFQDQNYGLHYEYTIPSDPL
PENQSSKAPEPLFMWTHTSWEDCDATCGGGERKTTVSCTKIMSKNISIVDNEKCKYLTKPEPQIRKCNEQ
PCQTRWMMTEWTPCSRTCGKGMQSRQVACTQQLSNGTLIRARERDCIGPKPASAQRCEGQDCMTVWEAGV
WSECSVKCGKGIRHRTVRCTNPRKKCVLSTRPREAEDCEDYSKCYVWRMGDWSKCSITCGKGMQSRVIQC
MHKITGRHGNECFSSEKPAAYRPCHLQPCNEKINVNTITSPRLAALTFKCLGDQWPVYCRVIREKNLCQD
MRWYQRCCETCRDFYAQKLQQKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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