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Report for CCDS91848.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91848.1 Public Homo sapiens 14 RPGRIP1 24 110 108 CCDS HistoryNCBI Gene:57096Re-query CCDS DB by CCDS ID:91848.1Re-query CCDS DB by GeneID:57096See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91848.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382933.8 ENSP00000372391.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382933.8Link to Ensembl Protein Viewer:ENSP00000372391.4Re-query CCDS DB by Nucleotide ID:ENST00000382933Re-query CCDS DB by Protein ID:ENSP00000372391
Original member Current member NCBI NM_001377523.1 NP_001364452.1 Accepted alive Link to Nucleotide Sequence:NM_001377523.1Link to Protein Sequence:NP_001364452.1Re-query CCDS DB by Nucleotide ID:NM_001377523Re-query CCDS DB by Protein ID:NP_001364452Link to BLAST:NP_001364452.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364452.1 612 Q96KN7-4 612 100% 0 0

Chromosomal Locations for CCDS 91848.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21317619 21317850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21320017 21320177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21321259 21321402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21321854 21322004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21327623 21327807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21328424 21328627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21330249 21330387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21334605 21334705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21343036 21343228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21345113 21345197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21348172 21348302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21351104 21351216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1839 nt):
ATGCTGAAACTGGATAATAAAGACGTCATATCACACCCCTTGGGGTATCCATCTGAGAGCTTGCTTTCCA
TTGCCAGCATGCTGGACAGCAGTGACAGCTCCAGTCAGCCCCACTGGAGCAACGAGCTCATAGCGGAACA
GCTACAGCAGCAAGTCTCTCAGCTGCAGGATCAGCTGGATGCTGAGCTGGAGGACAAGAGAAAAGTTTTA
CTTGAGCTGTCCAGGGAGAAAGCCCAAAATGAGGATCTGAAGCTTGAAGTCACCAACATACTTCAGAAGC
ATAAACAGGAAGTAGAGCTCCTCCAAAATGCAGCCACAATTTCCCAACCTCCTGACAGGCAATCTGAACC
AGCCACTCACCCAGCTGTATTGCAAGAGAACACTCAGATCGAGCCAAGTGAACCCAAAAACCAAGAAGAA
AAGAAACTGTCCCAGGTGCTAAATGAGTTGCAAGTATCACACGCAGAGACCACATTGGAACTAGAAAAGA
CCAGGGACATGCTTATTCTGCAGCGCAAAATCAACGTGTGTTATCAGGAGGAACTGGAGGCAATGATGAC
AAAAGCTGACAATGATAATAGAGATCACAAAGAAAAGCTGGAGAGGTTGACTCGACTACTAGACCTCAAG
AATAACCGTATCAAGCAGCTGGAAGGTATTTTAAGAAGCCATGACCTTCCAACATCTGGTGATTTTAACC
TCACTGACCCTGCAGAGAAACCCAACGGATCTATTCAAGTGCAACTGGATTGGAAGTTTCCCTACATACC
CCCTGAGAGCTTCCTGAAACCAGAAGCTCAGACTAAGGGGAAGGATACCAAGGACAGTTCAAAGATCTCA
TCTGAAGAGGAAAAGGCTTCATTTCCTTCCCAGGATCAGATGGCATCTCCTGAGGTTCCCATTGAAGCTG
GCCAGTATCGATCTAAGAGAAAACCTCCTCATGGGGGAGAAAGAAAGGAGAAGGAGCACCAGGTTGTGAG
CTACTCAAGAAGAAAACATGGCAAAAGAATAGGTGTTCAAGGAAAGAATAGAATGGAGTATCTTAGCCTT
AACATCTTAAATGGAAATACACCAGAGCAGGTGAATTACACTGAGTGGAAGTTCTCAGAGACTAACAGCT
TCATAGGTGATGGCTTTAAAAATCAGCACGAGGAAGAGGAAATGACATTATCCCATTCAGCACTGAAACA
GAAGGAACCTCTACATCCTGTAAATGACAAAGAATCCTCTGAACAAGGTTCTGAAGTCAGTGAAGCACAA
ACTACCGACAGTGATGATGTCATAGTGCCACCCATGTCTCAGAAATATCCTAAGGCAGATTCAGAGAAGA
TGTGCATTGAAATTGTCTCCCTGGCCTTCTACCCAGAGGCAGAAGTGATGTCTGATGAGAACATAAAACA
GGTGTATGTGGAGTACAAATTCTACGACCTACCCTTGTCGGAGACAGAGACTCCAGTGTCCCTAAGGAAG
CCTAGGGCAGGAGAAGAAATCCACTTTCACTTTAGCAAGGTAATAGACCTGGACCCACAGGAGCAGCAAG
GCCGAAGGCGGTTTCTGTTCGACATGCTGAATGGACAAGATCCTGATCAAGGACATTTAAAGTTTACAGT
GGTAAGTGATCCTCTGGATGAAGAAAAGAAAGAATGTGAAGAAGTGGGATATGCATATCTTCAACTGTGG
CAGATCCTGGAGTCAGGAAGAGATATTCTAGAGCAAGAGCTAGACATTGTTAGCCCTGAAGATCTGGCTA
CCCCAATAGGAAGGCTGAAGGTTTCCCTTCAAGCAGCTGCTGTCCTCCATGCTATTTACAAGGAGATGAC
TGAAGATTTGTTTTCATGA

Translation (612 aa):
MLKLDNKDVISHPLGYPSESLLSIASMLDSSDSSSQPHWSNELIAEQLQQQVSQLQDQLDAELEDKRKVL
LELSREKAQNEDLKLEVTNILQKHKQEVELLQNAATISQPPDRQSEPATHPAVLQENTQIEPSEPKNQEE
KKLSQVLNELQVSHAETTLELEKTRDMLILQRKINVCYQEELEAMMTKADNDNRDHKEKLERLTRLLDLK
NNRIKQLEGILRSHDLPTSGDFNLTDPAEKPNGSIQVQLDWKFPYIPPESFLKPEAQTKGKDTKDSSKIS
SEEEKASFPSQDQMASPEVPIEAGQYRSKRKPPHGGERKEKEHQVVSYSRRKHGKRIGVQGKNRMEYLSL
NILNGNTPEQVNYTEWKFSETNSFIGDGFKNQHEEEEMTLSHSALKQKEPLHPVNDKESSEQGSEVSEAQ
TTDSDDVIVPPMSQKYPKADSEKMCIEIVSLAFYPEAEVMSDENIKQVYVEYKFYDLPLSETETPVSLRK
PRAGEEIHFHFSKVIDLDPQEQQGRRRFLFDMLNGQDPDQGHLKFTVVSDPLDEEKKECEEVGYAYLQLW
QILESGRDILEQELDIVSPEDLATPIGRLKVSLQAAAVLHAIYKEMTEDLFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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