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Report for CCDS17006.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17006.1 Public Mus musculus 2 Mybl2 23 108 98 CCDS HistoryNCBI Gene:17865Re-query CCDS DB by CCDS ID:17006.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 17006.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018005.9 ENSMUSP00000018005.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018005.9Link to Ensembl Protein Viewer:ENSMUSP00000018005.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000018005Re-query CCDS DB by Protein ID:ENSMUSP00000018005
Original member Current member NCBI NM_008652.2 NP_032678.1 Accepted alive Link to Nucleotide Sequence:NM_008652.2Link to Protein Sequence:NP_032678.1Re-query CCDS DB by Nucleotide ID:NM_008652Re-query CCDS DB by Protein ID:NP_032678Link to BLAST:NP_032678.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032678.1 704 P48972 704 100% 0 0

Chromosomal Locations for CCDS 17006.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 163054829 163054848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163059501 163059594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163061524 163061595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163062457 163062549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163064280 163064500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163068156 163068315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163072624 163072914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163074382 163074804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163075636 163075775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163077787 163077889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163079594 163079707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163080718 163080822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163082550 163082699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163083166 163083294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGTCTCGGCGGACGCGCTGCGAGGATCTGGATGAGTTACACTACCAGGACGTGGACTCAGACCTCCTGG
AGCAGAGAGACAACAGATGTAAGGTTAAATGGACCCACGAGGAGGACGAGCAGTTGAGGGCCCTGGTGAG
GCAGTTTGGACAGCAAGACTGGAAGTTCTTGGCCAGTCACTTTCCTAACCGCACAGACCAGCAATGCCAG
TACCGGTGGCTGAGGGTTTTGAATCCCGACCTTGTTAAGGGACCATGGACCAAAGAGGAAGATCAAAAGG
TCATTGAGTTGGTCAAGAAGTATGGCACCAAACAGTGGACGCTGATAGCCAAGCACCTGAAGGGCCGGCT
GGGGAAGCAGTGCCGTGAGCGCTGGCACAACCACCTCAACCCCGAGGTGAAGAAGTCATGCTGGACCGAG
GAGGAAGACAGGATAATCTGTGAGGCCCATAAAGTCCTGGGTAACCGCTGGGCTGAGATCGCCAAGATGC
TACCAGGGAGGACGGACAATGCTGTGAAGAATCACTGGAACTCCACTATCAAAAGGAAAGTCGACACGGG
AGGTTTCCCAGCCGAGTCCAGGGACTGCAAGCCTGTCTACTTGCTCCTGGAGCTGGAGGACAAGGAACAG
CACCAGGGTGTCCAGCCGGTGGACGGCCAGGGAAGTCTCGTGAGCAGCTGGCCGCTGGTGCCCTCTATTG
TGAAGGAGGAGAGCAGCGAGGAGGAGATTGCCATAGCTGCTACTTCTGCTAAAGAACTCGGACATGAGCC
TGTCCCTGCTGATCTGGGAGAAGTGCGCACCCCAGAGCCCCCAGAATCTCTCAAGCGTGAATACCAGGAG
TTCTCCTCCCCGGAAACGAGCCTGCCCTACAAGTGGGTGGTAGAGGCGGCAAACCTCCTCATCCCGGCTG
TGGGGTCCAGCCTCTCTGAAGCTCTGGACTTGATTGAGTCGGACCCTGATGCTTGGTGCGACCTGAGTAA
ATTTGACCTTCCTGAAGAACCCTCTACGGAGGGCAGTGTCGTCAGCAGCCCAGTGCAGCCCCAGACGTCG
CAGCAGCAGCAGGAGGAGGCACTGCAGTCATCCCAGCAGGCTGCCACGCCGGGGCCCAGTGTGACTGAGT
ACCGCCTTGATGGCCACACTATTTCAGACCTGAGCCGGAGCAGTCGGGGGGAGCTGATCCCCATTTCTCC
TAGCACTGAGTTTGGGGGCTCAGGCATTGGCACACCTCCCTCAGTGCTCAAGCGACAGAAGAAACGGCGT
GTGGCCCTGTCGCCTGTCACAGAGAACAGTGCCAGCCTGTCCTTCCTGGACTCTTGTAACAGCCTCACCC
CGAAGAGCACGCCTGTCAAAACCCTCCCCTTCTCTCCTTCCCAGTTTCTGAACTTCTGGAACAAACAGGA
TACCCTGGAGCTGGAGAGCCCCTCACTGACATCCACTCCAGTGTGTAGCCAAAAGGTGGTCGTCACCACG
CCCCTGCACAGGGATAAGACACCCCTGCACCAGAAGTATCCATCATCAGAAGTACTCCCAGATCAGAAGT
ACTCCATGGACAACACTCCCCACACGCCAACCCCGTTCAAGAATGCCCTGGAGAAGTACGGACCGCTGAA
GCCCCTGCCGCAGACTCCGCACCTGGAGGAGGACTTGAAGGAGGTGCTCCGTTCTGAGGCCGGCATGGAG
CTCATCATTGAGGATGACATGAGGCCCGAGAAGCAGAAGAGAAAGCCTGGGCTGCGGCGAAGCCCTATCA
AGAAGGTCCGCAAGTCTCTGGCTCTCGACATTATGGATGAAGATGGGAAGCTGATGTCCTCTACCATGCC
CAAACCCCTGTCCTTGCCAACCAGTGTCACACCCAGCTCCTGTGGCTTCACCTCGCCAGGTAGCAAAGAG
GGTAACAGCCTGCTCAACCAGGGTTTCCTACAGGCCAAACCCGAGAAGGTGGTGGCCGCCCAGAAGACTC
GGAGCCACATTCCAACCCCTGCCCCTATGACCCATGCCTGGAAGACGGTGGCCTGTGGGGGCACCAAAGA
CCAGCTCTTCATGCAGGAGAAAGCCCGGCAGCTCCTGAGCCGCCTGAAGTCCAGCCACACATCTCGGACC
CTCATTCTGTCCTGA

Translation (704 aa):
MSRRTRCEDLDELHYQDVDSDLLEQRDNRCKVKWTHEEDEQLRALVRQFGQQDWKFLASHFPNRTDQQCQ
YRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSCWTE
EEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKVDTGGFPAESRDCKPVYLLLELEDKEQ
HQGVQPVDGQGSLVSSWPLVPSIVKEESSEEEIAIAATSAKELGHEPVPADLGEVRTPEPPESLKREYQE
FSSPETSLPYKWVVEAANLLIPAVGSSLSEALDLIESDPDAWCDLSKFDLPEEPSTEGSVVSSPVQPQTS
QQQQEEALQSSQQAATPGPSVTEYRLDGHTISDLSRSSRGELIPISPSTEFGGSGIGTPPSVLKRQKKRR
VALSPVTENSASLSFLDSCNSLTPKSTPVKTLPFSPSQFLNFWNKQDTLELESPSLTSTPVCSQKVVVTT
PLHRDKTPLHQKYPSSEVLPDQKYSMDNTPHTPTPFKNALEKYGPLKPLPQTPHLEEDLKEVLRSEAGME
LIIEDDMRPEKQKRKPGLRRSPIKKVRKSLALDIMDEDGKLMSSTMPKPLSLPTSVTPSSCGFTSPGSKE
GNSLLNQGFLQAKPEKVVAAQKTRSHIPTPAPMTHAWKTVACGGTKDQLFMQEKARQLLSRLKSSHTSRT
LILS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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