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Report for CCDS41322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41322.1 Public Homo sapiens 1 MUTYH 24 110 108 CCDS HistoryNCBI Gene:4595Re-query CCDS DB by CCDS ID:41322.1Re-query CCDS DB by GeneID:4595See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 41322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355498.6 ENSP00000347685.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355498.6Link to Ensembl Protein Viewer:ENSP00000347685.2Re-query CCDS DB by Nucleotide ID:ENST00000355498Re-query CCDS DB by Protein ID:ENSP00000347685
Original member Current member EBI ENST00000372104.5 ENSP00000361176.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372104.5Link to Ensembl Protein Viewer:ENSP00000361176.1Re-query CCDS DB by Nucleotide ID:ENST00000372104Re-query CCDS DB by Protein ID:ENSP00000361176
Original member Current member EBI ENST00000456914.7 ENSP00000407590.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000456914.7Link to Ensembl Protein Viewer:ENSP00000407590.2Re-query CCDS DB by Nucleotide ID:ENST00000456914Re-query CCDS DB by Protein ID:ENSP00000407590
Original member Current member NCBI NM_001048171.2 NP_001041636.2 Accepted alive Link to Nucleotide Sequence:NM_001048171.2Link to Protein Sequence:NP_001041636.2Re-query CCDS DB by Nucleotide ID:NM_001048171Re-query CCDS DB by Protein ID:NP_001041636Link to BLAST:NP_001041636.2
Original member Current member NCBI NM_001048173.2 NP_001041638.1 Accepted alive Link to Nucleotide Sequence:NM_001048173.2Link to Protein Sequence:NP_001041638.1Re-query CCDS DB by Nucleotide ID:NM_001048173Re-query CCDS DB by Protein ID:NP_001041638Link to BLAST:NP_001041638.1
Original member Current member NCBI NM_001048174.2 NP_001041639.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001048174.2Link to Protein Sequence:NP_001041639.1Re-query CCDS DB by Nucleotide ID:NM_001048174Re-query CCDS DB by Protein ID:NP_001041639Link to BLAST:NP_001041639.1
Original member Current member NCBI NM_001293195.2 NP_001280124.1 Accepted alive Link to Nucleotide Sequence:NM_001293195.2Link to Protein Sequence:NP_001280124.1Re-query CCDS DB by Nucleotide ID:NM_001293195Re-query CCDS DB by Protein ID:NP_001280124Link to BLAST:NP_001280124.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001041636.2 521 Q9UIF7-6 521 100% 0 0
NP_001041638.1 521 Q9UIF7-6 521 100% 0 0
NP_001041639.1 521 Q9UIF7-6 521 100% 0 0
NP_001280124.1 521 Q9UIF7-6 521 100% 0 0

Chromosomal Locations for CCDS 41322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 45329306 45329437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45330516 45330557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45331182 45331334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45331420 45331556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45331661 45331849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45332023 45332086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45332166 45332310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45332391 45332488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45332574 45332687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45332763 45332834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45332918 45332959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45333097 45333170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45333285 45333324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45333413 45333561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 45334391 45334505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGAGGAAGCCACGAGCAGCCGTGGGAAGTGGTCACAGGAAGCAGGCAGCCAGCCAGGAAGGGAGGCAGA
AGCATGCTAAGAACAACAGTCAGGCCAAGCCTTCTGCCTGTGATGGCCTGGCCAGGCAGCCGGAAGAGGT
GGTATTGCAGGCCTCTGTCTCCTCATACCATCTATTCAGAGACGTAGCTGAAGTCACAGCCTTCCGAGGG
AGCCTGCTAAGCTGGTACGACCAAGAGAAACGGGACCTACCATGGAGAAGACGGGCAGAAGATGAGATGG
ACCTGGACAGGCGGGCATATGCTGTGTGGGTCTCAGAGGTCATGCTGCAGCAGACCCAGGTTGCCACTGT
GATCAACTACTATACCGGATGGATGCAGAAGTGGCCTACACTGCAGGACCTGGCCAGTGCTTCCCTGGAG
GAGGTGAATCAACTCTGGGCTGGCCTGGGCTACTATTCTCGTGGCCGGCGGCTGCAGGAGGGAGCTCGGA
AGGTGGTAGAGGAGCTAGGGGGCCACATGCCACGTACAGCAGAGACCCTGCAGCAGCTCCTGCCTGGCGT
GGGGCGCTACACAGCTGGGGCCATTGCCTCTATCGCCTTTGGCCAGGCAACCGGTGTGGTGGATGGCAAC
GTAGCACGGGTGCTGTGCCGTGTCCGAGCCATTGGTGCTGATCCCAGCAGCACCCTTGTTTCCCAGCAGC
TCTGGGGTCTAGCCCAGCAGCTGGTGGACCCAGCCCGGCCAGGAGATTTCAACCAAGCAGCCATGGAGCT
AGGGGCCACAGTGTGTACCCCACAGCGCCCACTGTGCAGCCAGTGCCCTGTGGAGAGCCTGTGCCGGGCA
CGCCAGAGAGTGGAGCAGGAACAGCTCTTAGCCTCAGGGAGCCTGTCGGGCAGTCCTGACGTGGAGGAGT
GTGCTCCCAACACTGGACAGTGCCACCTGTGCCTGCCTCCCTCGGAGCCCTGGGACCAGACCCTGGGAGT
GGTCAACTTCCCCAGAAAGGCCAGCCGCAAGCCCCCCAGGGAGGAGAGCTCTGCCACCTGTGTTCTGGAA
CAGCCTGGGGCCCTTGGGGCCCAAATTCTGCTGGTGCAGAGGCCCAACTCAGGTCTGCTGGCAGGACTGT
GGGAGTTCCCGTCCGTGACCTGGGAGCCCTCAGAGCAGCTTCAGCGCAAGGCCCTGCTGCAGGAACTACA
GCGTTGGGCTGGGCCCCTCCCAGCCACGCACCTCCGGCACCTTGGGGAGGTTGTCCACACCTTCTCTCAC
ATCAAGCTGACATATCAAGTATATGGGCTGGCCTTGGAAGGGCAGACCCCAGTGACCACCGTACCACCAG
GTGCTCGCTGGCTGACGCAGGAGGAATTTCACACCGCAGCTGTTTCCACCGCCATGAAAAAGGTTTTCCG
TGTGTATCAGGGCCAACAGCCAGGGACCTGTATGGGTTCCAAAAGGTCCCAGGTGTCCTCTCCGTGCAGT
CGGAAAAAGCCCCGCATGGGCCAGCAAGTCCTGGATAATTTCTTTCGGTCTCACATCTCCACTGATGCAC
ACAGCCTCAACAGTGCAGCCCAGTGA

Translation (521 aa):
MRKPRAAVGSGHRKQAASQEGRQKHAKNNSQAKPSACDGLARQPEEVVLQASVSSYHLFRDVAEVTAFRG
SLLSWYDQEKRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVINYYTGWMQKWPTLQDLASASLE
EVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGN
VARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRA
RQRVEQEQLLASGSLSGSPDVEECAPNTGQCHLCLPPSEPWDQTLGVVNFPRKASRKPPREESSATCVLE
QPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSH
IKLTYQVYGLALEGQTPVTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQGQQPGTCMGSKRSQVSSPCS
RKKPRMGQQVLDNFFRSHISTDAHSLNSAAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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