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Report for CCDS6804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6804.1 Public Homo sapiens 9 ORM2 24 110 108 CCDS HistoryNCBI Gene:5005Re-query CCDS DB by CCDS ID:6804.1Re-query CCDS DB by GeneID:5005See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6804.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431067.4 ENSP00000394936.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000431067.4Link to Ensembl Protein Viewer:ENSP00000394936.2Re-query CCDS DB by Nucleotide ID:ENST00000431067Re-query CCDS DB by Protein ID:ENSP00000394936
Original member Current member NCBI NM_000608.4 NP_000599.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000608.4Link to Protein Sequence:NP_000599.1Re-query CCDS DB by Nucleotide ID:NM_000608Re-query CCDS DB by Protein ID:NP_000599Link to BLAST:NP_000599.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000599.1 201 P19652 201 100% 0 0

Chromosomal Locations for CCDS 6804.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 114329905 114330018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114330434 114330576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114330792 114330862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114331567 114331674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114331826 114331929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 114333069 114333134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCGCTGTCCTGGGTTCTTACAGTCCTGAGCCTCCTACCTCTGCTGGAAGCCCAGATCCCATTGTGTG
CCAACCTAGTACCGGTGCCCATCACCAACGCCACCCTGGACCGGATCACTGGCAAGTGGTTTTATATCGC
ATCGGCCTTTCGAAACGAGGAGTACAATAAGTCGGTTCAGGAGATCCAAGCAACCTTCTTTTACTTTACC
CCCAACAAGACAGAGGACACGATCTTTCTCAGAGAGTACCAGACCCGCCAGAACCAGTGCTTCTATAACT
CCAGTTACCTGAATGTCCAGCGGGAGAATGGGACCGTCTCCAGATACGAGGGAGGCCGAGAACATGTTGC
TCACCTGCTGTTCCTTAGGGACACCAAGACCTTGATGTTTGGTTCCTACCTGGACGATGAGAAGAACTGG
GGGCTGTCTTTCTATGCTGACAAGCCAGAGACGACCAAGGAGCAACTGGGAGAGTTCTACGAAGCTCTCG
ACTGCTTGTGCATTCCCAGGTCAGATGTCATGTACACCGACTGGAAAAAGGATAAGTGTGAGCCACTGGA
GAAGCAGCACGAGAAGGAGAGGAAACAGGAGGAGGGGGAATCCTAG

Translation (201 aa):
MALSWVLTVLSLLPLLEAQIPLCANLVPVPITNATLDRITGKWFYIASAFRNEEYNKSVQEIQATFFYFT
PNKTEDTIFLREYQTRQNQCFYNSSYLNVQRENGTVSRYEGGREHVAHLLFLRDTKTLMFGSYLDDEKNW
GLSFYADKPETTKEQLGEFYEALDCLCIPRSDVMYTDWKKDKCEPLEKQHEKERKQEEGES


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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