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Report for CCDS55778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55778.1 Public Homo sapiens 11 LRRC51 24 110 108 CCDS HistoryNCBI Gene:120356739Re-query CCDS DB by CCDS ID:55778.1Re-query CCDS DB by GeneID:120356739See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55778.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423494.6 ENSP00000441249.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423494.6Link to Ensembl Protein Viewer:ENSP00000441249.1Re-query CCDS DB by Nucleotide ID:ENST00000423494Re-query CCDS DB by Protein ID:ENSP00000441249
Original member Current member NCBI NM_001205138.4 NP_001192067.1 Accepted alive Link to Nucleotide Sequence:NM_001205138.4Link to Protein Sequence:NP_001192067.1Re-query CCDS DB by Nucleotide ID:NM_001205138Re-query CCDS DB by Protein ID:NP_001192067Link to BLAST:NP_001192067.1

Chromosomal Locations for CCDS 55778.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 72088353 72088380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72093496 72093701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72094948 72095096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 72095379 72095520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGTGGAGTTTCAGCCATCAGTGACAGATCTGGTAAATGAGGAGCCAAGGACAGGACTACGACCACTGA
AGCGTTCAAAGTCGGGGAAATCACTGACCCAGTCCCTGTGGCTGAATAACAATGTTCTCAATGATCTGAG
AGACTTCAACCAGGTGGCTTCACAGCTGTTGGAGCACCCAGAGAACCTGGCCTGGATCGACCTGTCCTTT
AATGACCTGACTTCCATTGACCCTGTCCTAACAACTTTCTTCAACCTGAGTGTCCTCTATCTTCACGGCA
ACAGCATCCAGCGCCTGGGGGAGGTGAATAAGCTGGCTGTCCTTCCTCGGCTCCGTAGCCTGACACTCCA
TGGGAACCCCATGGAGGAAGAGAAAGGGTATAGGCAATATGTGCTGTGCACCCTGTCCCGTATCACCACG
TTCGACTTCAGTGGGGTCACCAAAGCAGACCGCACCACAGCTGAAGTCTGGAAACGCATGAACATCAAGC
CCAAGAAGGCCTGGACCAAGCAGAATACACTTTGA

Translation (174 aa):
MVEFQPSVTDLVNEEPRTGLRPLKRSKSGKSLTQSLWLNNNVLNDLRDFNQVASQLLEHPENLAWIDLSF
NDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLSRITT
FDFSGVTKADRTTAEVWKRMNIKPKKAWTKQNTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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