NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45285.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45285.1 Public Homo sapiens 15 DENND4A 24 110 108 CCDS HistoryNCBI Gene:10260Re-query CCDS DB by CCDS ID:45285.1Re-query CCDS DB by GeneID:10260See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45285.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431932.6 ENSP00000396830.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431932.6Link to Ensembl Protein Viewer:ENSP00000396830.2Re-query CCDS DB by Nucleotide ID:ENST00000431932Re-query CCDS DB by Protein ID:ENSP00000396830
Original member Current member NCBI NM_001376919.1 NP_001363848.1 Accepted alive Link to Nucleotide Sequence:NM_001376919.1Link to Protein Sequence:NP_001363848.1Re-query CCDS DB by Nucleotide ID:NM_001376919Re-query CCDS DB by Protein ID:NP_001363848Link to BLAST:NP_001363848.1
Original member Current member NCBI NM_001376920.1 NP_001363849.1 Accepted alive Link to Nucleotide Sequence:NM_001376920.1Link to Protein Sequence:NP_001363849.1Re-query CCDS DB by Nucleotide ID:NM_001376920Re-query CCDS DB by Protein ID:NP_001363849Link to BLAST:NP_001363849.1
Original member Current member NCBI NM_005848.4 NP_005839.3 Accepted alive Link to Nucleotide Sequence:NM_005848.4Link to Protein Sequence:NP_005839.3Re-query CCDS DB by Nucleotide ID:NM_005848Re-query CCDS DB by Protein ID:NP_005839Link to BLAST:NP_005839.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363848.1 1863 Q7Z401-1 1863 100% 0 0
NP_001363849.1 1863 Q7Z401-1 1863 100% 0 0
NP_005839.3 1863 Q7Z401-1 1863 100% 0 0

Chromosomal Locations for CCDS 45285.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65661851 65661987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65664330 65664394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65664560 65664722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65665345 65665462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65667449 65667703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65667925 65668123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65669779 65669925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65670013 65670188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65671792 65671886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65676445 65676634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65690415 65691511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65696366 65696497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65697267 65697383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65701051 65701192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65701762 65701890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65702305 65702511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65702873 65703008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65706091 65706224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65715478 65715623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65717778 65717996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65722848 65722948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65729072 65729247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65729534 65729678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65731642 65731700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65732752 65732818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65737707 65737945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65738706 65738875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65741715 65741784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65752379 65752628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65756140 65756450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5592 nt):
ATGATTGAAGACAAGGGGCCTCGTGTTGCTGACTACTTTGTTGTAGCAGGATTAACTGATGTTTCAAAGC
CTCTAGAAGAAGAAATTCACTTCAATGATGCTTGTCATAAAGTAGCTAAACCAAAAGAACCTATTACAGA
TGTTTCAGTTATTATCAAATCTCTTGGGGAGGAAGTCCCACAGGATTATATCTGTATTGATGTTACCCCA
ACTGGATTGTCAGCTGATCTTAATAATGGAAGTCTTGTGGGGCCACAGATTTACCTTTGCTATAGAAGAG
GAAGAGATAAGCCTCCACTTACAGATCTGGGGGTTTTATATGACTGGAAAGAAAGATTGAAACAGGGTTG
TGAAATTATTCAGAGTACTCCCTATGGGCGCCCCGCAAATATTAGTGGGAGTACCTCATCACAAAGAATT
TATATCACTTACCGAAGAGCCTCTGAAAACATGACTCAGAATACGTTGGCTGTCACTGACATATGTATTA
TTATACCCAGTAAAGGAGAAAGCCCACCACACACGTTCTGCAAAGTCGACAAGAATCTCAATAACAGTAT
GTGGGGATCAGCAGTATACTTGTGTTATAAAAAATCGGTGGCAAAGACGAACACTGTATCTTACAAAGCT
GGCCTAATTTGTAGATATCCTCAAGAAGATTATGAGTCATTCTCACTACCGGAATCTGTTCCTCTATTTT
GTTTACCAATGGGTGCAACCATTGAATGTTGGCCATCAAATAGCAAATACCCTCTGCCTGTATTTTCTAC
TTTTGTTTTAACTGGAGCCTCAGCTGAAAAGGTTTATGGTGCTGCTATTCAGTTTTATGAACCATACTCT
GAGGAGAATCTCACAGAAAAGCAGAGACTTCTTTTGGGTTTAACATCAGCAGATGGGAAGTCTGATAGTT
CCAAAACAATTCATACTAACAAATGCATCTGTCTTCTTTCTCACTGGCCTTTTTTTGATGCATTCAGGAA
GTTTCTGACTTTTCTGTATCGTTATTCCATCTCTGGGCCTCATGTCCTTCCAATTGAGAAGCATATTTCT
CATTTTATGCATAAAGTTCCTTTTCCATCTCCTCAGAGACCACGGATTTTAGTTCAGTTATCACCACATG
ATAATCTGATTCTCAGTCAGCCTGTGTCTTCACCTCTTCCACTAAGTGGTGGCAAGTTTTCAACACTACT
GCAGAATTTAGGCCCTGAAAATGCTGTGACACTACTGGTGTTTGCAGTAACAGAACATAAAATTCTTATC
CATTCCCTACGGCCATCCGTGCTTACTAGTGTGACAGAAGCATTAGTGTCTATGATTTTCCCTTTCCACT
GGCCATGCCCGTATGTTCCTCTCTGCCCACTGGCTTTAGCAGATGTCTTGAGTGCACCATGTCCATTCAT
AGTAGGGATTGATTCAAGATACTTTGATCTCTATGATCCTCCACCAGATGTCAGTTGTGTTGATGTAGAT
ACCAACACTATTTCTCAAATTGGTGACAAGAAAAATGTAGCCTGGAAGATACTTCCAAAGAAGCCATGTA
AAAATCTGATGAACACACTGAATAATTTGCATCAGCAATTGGCAAAATTGCAGCAGAGACCGAGAGATGA
TGGACTCATGGATTTAGCAATAAATGACTATGATTTTAATTCTGGAAAGAGGTTGCACATGATAGATTTG
GAAATCCAAGAGGCATTTTTGTTTTTCATGGCCTCTATTTTAAAAGGTTACAGATCATACTTAAGGCCAA
TAACACAAGCCCCATCTGAGACAGCCACAGATGCAGCCTCTCTCTTTGCCCTACAAGCTTTCTTAAGAAG
CCGGGACCGGTCACATCAAAAATTCTATAACATGATGACCAAAACACAAATGTTTATTCGCTTCATTGAA
GAATGTTCTTTTGTTAGTGACAAAGATGCAAGCCTGGCATTTTTTGATGATTGTGTAGATAAAGTGGATA
TGGACAAGAGCGGTGAAGTACGACTTATAGAACTGGATGAATCTTTCAAAAGTGAACACACTGTTTTTGT
AACACCACCTGAGATCCCCCACCTACCCAATGGTGAAGAACCCCCTTTACAGTACAGCTATAATGGATTT
CCAGTTCTTAGGAACAATTTATTTGAAAGACCTGAAGGATTTCTACAAGCAAAGAAGAACAAATTGCCTT
CAAAATCAAGTAGTCCTAATAGCCCTTTGCCCATGTTCAGAAGAACAAAACAGGAAATTAAATCAGCCCA
TAAAATTGCAAAGAGGTACTCTTCCATCCCTCAGATGTGGTCTAGGTGTCTACTGCGCCACTGTTATGGA
CTGTGGTTTATTTGTCTCCCAGCTTATGTGAAAGTCTGTCATTCAAAAGTCAGGGCTCTGAAAACAGCAT
ATGATGTGCTTAAAAAAATGCAGTCAAAGAAGATGGATCCACCTGATGAGGTATGCTACCGCATTCTTAT
GCAACTCTGTGGACAATATGATCAGCCAGTGCTTGCAGTTCGAGTGCTTTTTGAAATGCAGAAAGCTGGT
ATTGACCCCAATGCCATTACTTATGGTTATTATAATAAGGCTGTTTTGGAAAGTACCTGGCCTTCAAGAA
GTCGTAGTGGCTATTTTCTTTGGACAAAAGTAAGAAATGTTGTTTTAGGAGTAACACAGTTCAAAAGAGC
TTTAAAGAAGCATGCACACTTATCACAAACAACTCTCTCAGGTGGCCAGTCTGATCTTGGATATAATTCA
TTATCTAAAGATGAAGTTAGAAGAGGGGATACATCTACTGAAGACATTCAAGAAGAAAAAGATAAAAAAG
GGAGTGATTGTAGTTCCTTGTCAGAGAGTGAGAGTACAAAAGGAAGTGCTGATTGCCTTCCTAAGCTCAG
TTATCAAAATTCTTCCAGTATCGTTCGCCTCACTGGTACAAGTAACAACAGTGCTGGTAAAATATCAGGA
GAAAGCATGGAAAGCACACCTGAGCTGCTCTTAATATCATCTCTTGAAGATACAAATGAAACACGAAACA
TTCAAAGTAGATGCTTCAGGAAAAGACATAAAAGTGACAATGAAACTAATTTGCAGCAGCAAGTGGTCTG
GGGAAATAGAAACCGTAATCTTAGTGGAGGGGTACTGATGGGATTTATGCTCAATAGAATTAACCAGGAA
GCAACCCCTGGAGATATAGTTGAAAAATTGGGAGCTGATGCAAAAATTCTTTCAAATGTTATCTCAAAAA
GCACGAGACCAAATACTCTTGATATTGGGAAGCCACCTTTAAGATCAAAAAGAGACAGTCTAGAAAAGGA
ATCTAGTGATGATGATACACCTTTTGATGGTTCTAACTATTTGGCAGATAAAGTGGATTCTCCTGTTATT
TTTGACTTAGAAGACTTAGACAGTGAAACAGATGTATCAAAAGCAGGATGTGTTGCTACACAAAATCCCA
AGAGGATTCAACGTATGAACAGCAGCTTTTCAGTAAAACCTTTTGAAAAAACTGATGTCGCAACAGGATT
TGATCCCCTCTCTCTTTTGGTTGCTGAGACTGAACAGCAGCAAAAAGAAGAAGAGGAGGAGGATGAAGAT
GATAGCAAAAGCATTTCAACACCATCTGCTAGGCGTGATTTAGCTGAAGAAATTGTGATGTATATGAATA
ACATGAGCAGTCCTTTGACAAGTCGTACACCAAGCATTGATTTACAACGGGCATGTGATGATAAATTAAA
TAAGAAAAGTCCACCATTGGTCAAGGCATGCAGAAGATCTAGTCTGCCTCCTAATTCTCCTAAGCCAGTG
AGACTTACCAAATCTAAAAGTTACACAAAAAGTGAGGAGAAACCAAGGGATAGACTTTGGTCTTCTCCAG
CCTTCTCACCTACTTGCCCATTTAGGGAAGAATCTCAGGATACATTAACCCACTCATCACCTTCATTTAA
CTTAGATACACTACTAGTACCTAAACTAGATGTTCTAAGAAACAGTATGTTCACTGCTGGAAAAGGAGTT
GCAGAGAAAGCAAGCAAATGGTATTCAAGATTCACCATGTACACCACATCATCTAAGGATCAAAGTTCTG
ATCGTACCAGTCTTTCTTCAGTGGGAGCCCAGGATTCTGAATCTACCTCTTTAACAGATGAAGATGTCTG
CCATGAGTTGGAAGGACCTATCTCCTCTCAAGAGACCAGTGCTACTTCAGGGACTAAGAGAATTGATCTC
AGCCGAATAAGCCTGGAAAGTTCTGCATCCTTGGAAGGATCTCTGTCGAAGTTTGCCTTACCTGGGAAAT
CAGAAGTGACATCTTCCTTCAACGCGAGTAATACAAATATCTTCCAGAACTATGCAATGGAGGTTCTCAT
CTCAAGTTGCTCTCGGTGTAGAACTTGTGATTGTCTTGTCCATGATGAGGAAATCATGGCTGGCTGGACA
GCAGATGATTCAAATCTCAATACTACATGCCCATTCTGTGGCAATATCTTCTTACCCTTTCTGAATATAG
AAATAAGAGATTTAAGACGACCTGGAAGATACTTTCTAAAGTCAAGCCCATCAACAGAAAATATGCACTT
TCCATCCTCCATTTCAAGTCAGACGAGGCAGTCTTGCATTTCAACATCAGCCTCTGGTCTTGACACATCT
GCTCTCTCTGTTCAAGGGAATTTTGATCTAAATAGCAAATCTAAACTGCAGGAAAATTTTTGCACCCGAA
GTATTCAGATCCCTGCTAATAGATCAAAAACAGCTATGTCTAAATGTCCAATATTTCCAATGGCCAGGAG
TATTAGTACTTCTGGCCCCTTGGATAAGGAAGATACTGGAAGACAGAAGCTCATTTCTACAGGCAGCCTG
CCAGCTACTTTACAAGGAGCTACAGATTCTTTAGGTTTAGAATGGCACCTTCCAAGTCCCGATCCTGTCA
CTGTTCCGTATCTTAGTCCTTTAGTGGTATGGAAAGAACTTGAAAGCTTATTGGAAAATGAAGGTGATCA
TGCAATAACAGTAGCAGACTTTGTGGACCATCATCCAATTGTTTTTTGGAACCTGGTATGGTATTTCAGA
CGTCTTGACTTGCCCAGTAACTTACCTGGATTGATTCTTTCTTCTGAGCACTGTAACAAGTATTCAAAGA
TTCCCCGCCACTGTATGTCTGAAGATAGCAAATATGTTTTAATACAAATGTTATGGGACAATATGAAGTT
ACATCAGGATCCGGGACAGCCCTTGTACATTCTCTGGAATGCACACACCCAAAAATATCCAATGGTCCAT
TTATTGCAAAAAAGTGATAACTCATTTAACCAGGAACTGTTGAAAAGTATGGTAAAAAGCATTAAAATGA
ATGATGTCTATGGACCAATGAGTCAGATTTTAGAGACACTGAATAAGTGTCCACATTTTAAAAGACAGAG
GAGTTTATACAGAGAAATACTATTTCTCTCACTTGTGGCACTGGGAAGAGAAAACATTGATATAGATGCT
TTTGATAAAGAGTACAAGATGGCATACGATCGTCTCACACCTAGTCAAGTCAAGAGTACACACAACTGTG
ATAGACCACCAAGTACAGGGGTGATGGAATGTCGAAAAACCTTTGGAGAACCTTATCTTTAA

Translation (1863 aa):
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVPQDYICIDVTP
TGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDWKERLKQGCEIIQSTPYGRPANISGSTSSQRI
YITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVDKNLNNSMWGSAVYLCYKKSVAKTNTVSYKA
GLICRYPQEDYESFSLPESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYS
EENLTEKQRLLLGLTSADGKSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHIS
HFMHKVPFPSPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYDPPPDVSCVDVD
TNTISQIGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGLMDLAINDYDFNSGKRLHMIDL
EIQEAFLFFMASILKGYRSYLRPITQAPSETATDAASLFALQAFLRSRDRSHQKFYNMMTKTQMFIRFIE
ECSFVSDKDASLAFFDDCVDKVDMDKSGEVRLIELDESFKSEHTVFVTPPEIPHLPNGEEPPLQYSYNGF
PVLRNNLFERPEGFLQAKKNKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYG
LWFICLPAYVKVCHSKVRALKTAYDVLKKMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMQKAG
IDPNAITYGYYNKAVLESTWPSRSRSGYFLWTKVRNVVLGVTQFKRALKKHAHLSQTTLSGGQSDLGYNS
LSKDEVRRGDTSTEDIQEEKDKKGSDCSSLSESESTKGSADCLPKLSYQNSSSIVRLTGTSNNSAGKISG
ESMESTPELLLISSLEDTNETRNIQSRCFRKRHKSDNETNLQQQVVWGNRNRNLSGGVLMGFMLNRINQE
ATPGDIVEKLGADAKILSNVISKSTRPNTLDIGKPPLRSKRDSLEKESSDDDTPFDGSNYLADKVDSPVI
FDLEDLDSETDVSKAGCVATQNPKRIQRMNSSFSVKPFEKTDVATGFDPLSLLVAETEQQQKEEEEEDED
DSKSISTPSARRDLAEEIVMYMNNMSSPLTSRTPSIDLQRACDDKLNKKSPPLVKACRRSSLPPNSPKPV
RLTKSKSYTKSEEKPRDRLWSSPAFSPTCPFREESQDTLTHSSPSFNLDTLLVPKLDVLRNSMFTAGKGV
AEKASKWYSRFTMYTTSSKDQSSDRTSLSSVGAQDSESTSLTDEDVCHELEGPISSQETSATSGTKRIDL
SRISLESSASLEGSLSKFALPGKSEVTSSFNASNTNIFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWT
ADDSNLNTTCPFCGNIFLPFLNIEIRDLRRPGRYFLKSSPSTENMHFPSSISSQTRQSCISTSASGLDTS
ALSVQGNFDLNSKSKLQENFCTRSIQIPANRSKTAMSKCPIFPMARSISTSGPLDKEDTGRQKLISTGSL
PATLQGATDSLGLEWHLPSPDPVTVPYLSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFR
RLDLPSNLPGLILSSEHCNKYSKIPRHCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHTQKYPMVH
LLQKSDNSFNQELLKSMVKSIKMNDVYGPMSQILETLNKCPHFKRQRSLYREILFLSLVALGRENIDIDA
FDKEYKMAYDRLTPSQVKSTHNCDRPPSTGVMECRKTFGEPYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH