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Report for CCDS40437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40437.1 Public Mus musculus 8 Mt2 23 108 98 CCDS HistoryNCBI Gene:17750Re-query CCDS DB by CCDS ID:40437.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40437.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034214.7 ENSMUSP00000034214.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034214.7Link to Ensembl Protein Viewer:ENSMUSP00000034214.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034214Re-query CCDS DB by Protein ID:ENSMUSP00000034214
Original member Current member NCBI NM_008630.2 NP_032656.1 Accepted alive Link to Nucleotide Sequence:NM_008630.2Link to Protein Sequence:NP_032656.1Re-query CCDS DB by Nucleotide ID:NM_008630Re-query CCDS DB by Protein ID:NP_032656Link to BLAST:NP_032656.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032656.1 61 P02798 61 100% 0 0

Chromosomal Locations for CCDS 40437.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 94172848 94172875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94173127 94173192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94173336 94173427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (186 nt):
ATGGACCCCAACTGCTCCTGTGCCTCCGATGGATCCTGCTCCTGCGCTGGCGCCTGCAAATGCAAACAAT
GCAAATGTACTTCCTGCAAGAAAAGCTGCTGCTCCTGCTGCCCCGTGGGCTGTGCGAAGTGCTCCCAGGG
CTGCATCTGCAAAGAGGCTTCCGACAAGTGCAGCTGCTGTGCCTGA

Translation (61 aa):
MDPNCSCASDGSCSCAGACKCKQCKCTSCKKSCCSCCPVGCAKCSQGCICKEASDKCSCCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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