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Report for CCDS46472.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46472.1 Public Homo sapiens 2 OSGEPL1 24 110 108 CCDS HistoryNCBI Gene:64172Re-query CCDS DB by CCDS ID:46472.1Re-query CCDS DB by GeneID:64172See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 46472.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000264151.10 ENSP00000264151.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000264151.10Link to Ensembl Protein Viewer:ENSP00000264151.5Re-query CCDS DB by Nucleotide ID:ENST00000264151Re-query CCDS DB by Protein ID:ENSP00000264151
Original member Current member EBI ENST00000522700.5 ENSP00000429697.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522700.5Link to Ensembl Protein Viewer:ENSP00000429697.1Re-query CCDS DB by Nucleotide ID:ENST00000522700Re-query CCDS DB by Protein ID:ENSP00000429697
Original member Current member NCBI NM_001354347.2 NP_001341276.2 Accepted alive Link to Nucleotide Sequence:NM_001354347.2Link to Protein Sequence:NP_001341276.2Re-query CCDS DB by Nucleotide ID:NM_001354347Re-query CCDS DB by Protein ID:NP_001341276Link to BLAST:NP_001341276.2
Original member Current member NCBI NM_001376077.1 NP_001363006.1 Accepted alive Link to Nucleotide Sequence:NM_001376077.1Link to Protein Sequence:NP_001363006.1Re-query CCDS DB by Nucleotide ID:NM_001376077Re-query CCDS DB by Protein ID:NP_001363006Link to BLAST:NP_001363006.1
Original member Current member NCBI NM_001376078.1 NP_001363007.1 Accepted alive Link to Nucleotide Sequence:NM_001376078.1Link to Protein Sequence:NP_001363007.1Re-query CCDS DB by Nucleotide ID:NM_001376078Re-query CCDS DB by Protein ID:NP_001363007Link to BLAST:NP_001363007.1
Original member Current member NCBI NM_001376079.1 NP_001363008.1 Accepted alive Link to Nucleotide Sequence:NM_001376079.1Link to Protein Sequence:NP_001363008.1Re-query CCDS DB by Nucleotide ID:NM_001376079Re-query CCDS DB by Protein ID:NP_001363008Link to BLAST:NP_001363008.1
Original member Current member NCBI NM_001376080.1 NP_001363009.1 Accepted alive Link to Nucleotide Sequence:NM_001376080.1Link to Protein Sequence:NP_001363009.1Re-query CCDS DB by Nucleotide ID:NM_001376080Re-query CCDS DB by Protein ID:NP_001363009Link to BLAST:NP_001363009.1
Original member Current member NCBI NM_001376081.1 NP_001363010.1 Accepted alive Link to Nucleotide Sequence:NM_001376081.1Link to Protein Sequence:NP_001363010.1Re-query CCDS DB by Nucleotide ID:NM_001376081Re-query CCDS DB by Protein ID:NP_001363010Link to BLAST:NP_001363010.1
Original member Current member NCBI NM_001376082.1 NP_001363011.1 Accepted alive Link to Nucleotide Sequence:NM_001376082.1Link to Protein Sequence:NP_001363011.1Re-query CCDS DB by Nucleotide ID:NM_001376082Re-query CCDS DB by Protein ID:NP_001363011Link to BLAST:NP_001363011.1
Original member Current member NCBI NM_001376083.1 NP_001363012.1 Accepted alive Link to Nucleotide Sequence:NM_001376083.1Link to Protein Sequence:NP_001363012.1Re-query CCDS DB by Nucleotide ID:NM_001376083Re-query CCDS DB by Protein ID:NP_001363012Link to BLAST:NP_001363012.1
Original member Current member NCBI NM_022353.3 NP_071748.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022353.3Link to Protein Sequence:NP_071748.2Re-query CCDS DB by Nucleotide ID:NM_022353Re-query CCDS DB by Protein ID:NP_071748Link to BLAST:NP_071748.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341276.2 414 Q9H4B0-1 414 100% 0 0
NP_001363006.1 414 Q9H4B0-1 414 100% 0 0
NP_001363007.1 414 Q9H4B0-1 414 100% 0 0
NP_001363008.1 414 Q9H4B0-1 414 100% 0 0
NP_001363009.1 414 Q9H4B0-1 414 100% 0 0
NP_001363010.1 414 Q9H4B0-1 414 100% 0 0
NP_001363011.1 414 Q9H4B0-1 414 100% 0 0
NP_001363012.1 414 Q9H4B0-1 414 100% 0 0
NP_071748.2 414 Q9H4B0-1 414 100% 0 0

Chromosomal Locations for CCDS 46472.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 189750578 189750656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189752653 189752724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189752849 189752979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189753916 189754064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189754141 189754345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189755173 189755560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 189761420 189761640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1245 nt):
ATGCTAATCTTGACTAAGACTGCAGGAGTTTTTTTTAAACCATCAAAAAGGAAAGTTTATGAATTTTTAA
GAAGTTTTAATTTTCATCCTGGAACACTATTTCTTCATAAAATAGTATTGGGAATTGAAACTAGTTGTGA
TGATACAGCAGCTGCTGTGGTGGATGAAACTGGAAATGTGTTGGGAGAAGCAATACATTCCCAAACTGAA
GTTCATTTAAAAACAGGTGGGATTGTTCCTCCAGCAGCTCAACAGCTTCACAGAGAAAATATTCAACGAA
TAGTACAAGAAGCTCTTTCTGCCAGTGGAGTCTCTCCAAGTGACCTCTCAGCAATTGCAACTACCATAAA
ACCAGGACTTGCTTTAAGCCTGGGAGTGGGCTTATCATTTAGCTTACAGCTGGTAGGACAGTTAAAAAAG
CCATTCATTCCCATTCATCATATGGAGGCTCATGCACTTACTATTAGGTTGACCAATAAAGTAGAATTTC
CTTTTTTAGTTCTTTTGATTTCTGGAGGTCACTGTCTGTTGGCATTAGTTCAAGGAGTTTCAGATTTTCT
GCTTCTTGGAAAGTCTTTGGACATAGCACCAGGTGACATGCTTGACAAGGTGGCAAGAAGACTTTCTTTA
ATAAAACATCCAGAGTGCTCCACCATGAGTGGTGGGAAAGCCATAGAACATTTGGCCAAACAAGGAAATA
GATTTCATTTTGACATCAAACCTCCCTTGCATCATGCTAAAAATTGTGATTTTTCTTTTACTGGACTTCA
ACACGTTACTGATAAAATAATAATGAAAAAGGAAAAAGAGGAAGGTATTGAGAAGGGGCAAATCCTGTCT
TCAGCAGCAGACATTGCTGCCACAGTACAGCACACAATGGCATGTCATCTTGTGAAAAGAACACATCGGG
CTATTCTGTTTTGTAAGCAGAGAGACTTGTTACCTCAAAATAATGCAGTACTGGTTGCATCTGGTGGTGT
CGCAAGTAACTTCTATATCCGCAGAGCTCTGGAAATTTTAACAAATGCAACACAGTGCACTTTGTTGTGT
CCTCCTCCCAGACTATGCACTGATAATGGCATTATGATTGCATGGAATGGTATTGAAAGACTACGTGCTG
GCTTGGGCATTTTACATGACATAGAAGGCATCCGCTATGAACCAAAATGTCCTCTTGGAGTAGACATATC
AAAAGAAGTTGGAGAAGCTTCCATAAAAGTACCACAATTAAAAATGGAGATATGA

Translation (414 aa):
MLILTKTAGVFFKPSKRKVYEFLRSFNFHPGTLFLHKIVLGIETSCDDTAAAVVDETGNVLGEAIHSQTE
VHLKTGGIVPPAAQQLHRENIQRIVQEALSASGVSPSDLSAIATTIKPGLALSLGVGLSFSLQLVGQLKK
PFIPIHHMEAHALTIRLTNKVEFPFLVLLISGGHCLLALVQGVSDFLLLGKSLDIAPGDMLDKVARRLSL
IKHPECSTMSGGKAIEHLAKQGNRFHFDIKPPLHHAKNCDFSFTGLQHVTDKIIMKKEKEEGIEKGQILS
SAADIAATVQHTMACHLVKRTHRAILFCKQRDLLPQNNAVLVASGGVASNFYIRRALEILTNATQCTLLC
PPPRLCTDNGIMIAWNGIERLRAGLGILHDIEGIRYEPKCPLGVDISKEVGEASIKVPQLKMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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