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Report for CCDS6978.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6978.1 Public Homo sapiens 9 SARDH 24 110 108 CCDS HistoryNCBI Gene:1757Re-query CCDS DB by CCDS ID:6978.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6978.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371872.8 ENSP00000360938.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371872.8Link to Ensembl Protein Viewer:ENSP00000360938.4Re-query CCDS DB by Nucleotide ID:ENST00000371872Re-query CCDS DB by Protein ID:ENSP00000360938
Original member Current member EBI ENST00000439388.6 ENSP00000403084.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000439388.6Link to Ensembl Protein Viewer:ENSP00000403084.1Re-query CCDS DB by Nucleotide ID:ENST00000439388Re-query CCDS DB by Protein ID:ENSP00000403084
Original member Current member NCBI NM_001134707.2 NP_001128179.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001134707.2Link to Protein Sequence:NP_001128179.1Re-query CCDS DB by Nucleotide ID:NM_001134707Re-query CCDS DB by Protein ID:NP_001128179Link to BLAST:NP_001128179.1
Original member Current member NCBI NM_007101.4 NP_009032.2 Accepted alive Link to Nucleotide Sequence:NM_007101.4Link to Protein Sequence:NP_009032.2Re-query CCDS DB by Nucleotide ID:NM_007101Re-query CCDS DB by Protein ID:NP_009032Link to BLAST:NP_009032.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128179.1 918 Q9UL12-1 918 100% 0 0
NP_009032.2 918 Q9UL12-1 918 100% 0 0

Chromosomal Locations for CCDS 6978.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 133663889 133664014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133666735 133666870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133670584 133670752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133671535 133671697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133685193 133685286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133690380 133690527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133694258 133694371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133696223 133696361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133702916 133703029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133704948 133705031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133708287 133708428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133712619 133712709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133713038 133713124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133717326 133717455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133718938 133719042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133729765 133729865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133730064 133730187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133731305 133731484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133732423 133732601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133733843 133734173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2757 nt):
ATGGCCTCACTGAGCCGAGCCCTACGTGTGGCTGCTGCCCACCCTCGCCAGAGCCCTACCCGGGGCATGG
GGCCATGCAACCTGTCCAGCGCAGCTGGCCCCACAGCCGAGAAGAGTGTGCCATATCAGCGGACCCTGAA
GGAGGGACAGGGCACCTCGGTGGTGGCCCAAGGCCCAAGCCGGCCCCTGCCCAGCACGGCCAACGTGGTG
GTCATTGGTGGAGGCAGCTTGGGCTGCCAGACCCTGTACCACCTGGCCAAGCTGGGCATGAGTGGGGCGG
TGCTGCTGGAGCGGGAGCGGCTGACCTCCGGGACCACCTGGCACACGGCAGGCCTGCTGTGGCAGCTGCG
GCCCAGTGACGTGGAGGTGGAGCTTCTGGCCCACACTCGGCGGGTGGTGAGCCGGGAGCTGGAGGAGGAG
ACGGGACTACACACGGGCTGGATCCAGAATGGGGGCCTCTTCATCGCGTCCAACCGGCAGCGCCTGGACG
AGTACAAGAGGCTCATGTCGCTGGGCAAGGCGTATGGTGTGGAATCCCATGTGCTGAGCCCGGCAGAGAC
CAAGACTCTGTACCCGCTGATGAATGTGGACGACCTCTACGGGACCCTGTATGTGCCGCACGACGGTACC
ATGGACCCCGCTGGCACCTGTACCACCCTCGCCAGGGCAGCTTCTGCCCGAGGAGCACAGGTCATTGAGA
ACTGCCCAGTGACCGGCATTCGTGTGTGGACGGATGATTTTGGGGTGCGGCGGGTCGCGGGTGTGGAGAC
TCAGCATGGTTCCATCCAGACACCCTGCGTGGTCAACTGTGCAGGAGTGTGGGCAAGTGCTGTGGGCCGG
ATGGCTGGAGTCAAGGTCCCGCTGGTGGCCATGCACCATGCCTATGTCGTCACCGAGCGCATCGAGGGGA
TTCAGAACATGCCCAATGTCCGTGATCATGATGCCTCTGTCTACCTCCGCCTCCAAGGGGATGCCTTGTC
TGTGGGTGGCTATGAGGCCAACCCCATCTTTTGGGAGGAGGTGTCAGACAAGTTTGCCTTCGGCCTCTTT
GACCTGGACTGGGAGGTGTTCACCCAGCACATTGAAGGCGCCATCAACAGGGTCCCCGTGCTGGAGAAGA
CAGGAATCAAGTCCACGGTCTGCGGCCCTGAATCCTTCACGCCCGACCACAAGCCCCTGATGGGGGAGGC
ACCTGAGCTCCGAGGGTTCTTCCTGGGCTGTGGCTTCAACAGCGCAGGAATGATGCTGGGTGGTGGCTGT
GGGCAGGAGCTGGCCCACTGGATCATCCATGGGCGCCCGGAGAAGGACATGCATGGCTATGACATCAGGC
GCTTCCATCACTCGCTCACGGACCACCCCCGCTGGATCCGAGAGCGAAGCCATGAGTCCTACGCCAAGAA
CTACTCCGTCGTCTTCCCCCACGATGAGCCGCTGGCCGGGCGCAACATGAGGAGAGACCCGCTGCACGAG
GAACTCCTTGGACAAGGCTGCGTGTTCCAGGAGCGGCATGGCTGGGAGCGACCGGGATGGTTTCATCCCC
GAGGCCCAGCTCCGGTCCTCGAGTACGACTACTACGGGGCTTACGGGAGCCGCGCGCACGAGGACTACGC
CTACCGCAGGCTGCTGGCAGACGAGTACACCTTCGCCTTCCCGCCCCACCACGACACGATCAAGAAGGAG
TGCCTGGCCTGCAGAGGGGCCGCCGCTGTGTTTGACATGTCCTACTTCGGGAAGTTCTACCTGGTGGGGC
TGGATGCAAGGAAGGCTGCCGACTGGCTCTTCTCCGCAGATGTCAGCCGACCCCCAGGCTCCACCGTGTA
CACGTGCATGCTCAACCACCGTGGGGGCACCGAGAGTGACCTGACTGTCAGCCGCCTGGCACCCAGCCAC
CAGGCCTCCCCGCTGGCCCCCGCCTTTGAAGGGGACGGTTACTACCTGGCCATGGGCGGGGCCGTGGCCC
AGCACAACTGGTCCCACATCACCACCGTGCTGCAGGACCAGAAGTCCCAGTGCCAGCTCATCGACAGCTC
CGAGGACCTGGGTATGATCAGTATCCAGGGCCCAGCCAGCCGAGCCATTTTGCAGGAGGTGCTGGACGCA
GACCTGAGCAACGAGGCCTTCCCGTTCTCCACCCACAAGCTACTGAGAGCCGCAGGGCACCTGGTCCGAG
CCATGCGGCTGTCCTTTGTGGGGGAGCTGGGCTGGGAGCTGCACATTCCAAAGGCGTCCTGCGTGCCTGT
GTACCGGGCTGTGATGGCCGCGGGTGCCAAGCACGGCCTCATCAACGCAGGGTACCGCGCCATCGACTCC
CTGAGCATTGAGAAAGGCTACCGGCACTGGCACGCGGACCTGCGGCCAGACGACAGCCCCCTGGAGGCAG
GCCTGGCCTTCACCTGCAAGCTCAAGTCGCCGGTGCCCTTCCTGGGGAGGGAGGCCCTGGAGCAGCAGCG
GGCCGCAGGCCTCCGCCGGCGCCTGGTGTGCTTCACCATGGAGGACAAAGTACCCATGTTTGGCCTGGAG
GCCATCTGGAGGAACGGCCAAGTGGTGGGCCATGTCCGGAGGGCTGACTTTGGGTTCGCCATCGACAAGA
CCATCGCCTACGGTTACATCCATGACCCCAGCGGTGGGCCGGTCTCGCTGGACTTTGTGAAGAGCGGGGA
CTATGCCCTGGAGAGAATGGGGGTGACCTATGGTGCCCAGGCTCACCTGAAGTCGCCCTTCGACCCCAAC
AACAAGAGGGTGAAGGGAATCTACTGA

Translation (918 aa):
MASLSRALRVAAAHPRQSPTRGMGPCNLSSAAGPTAEKSVPYQRTLKEGQGTSVVAQGPSRPLPSTANVV
VIGGGSLGCQTLYHLAKLGMSGAVLLERERLTSGTTWHTAGLLWQLRPSDVEVELLAHTRRVVSRELEEE
TGLHTGWIQNGGLFIASNRQRLDEYKRLMSLGKAYGVESHVLSPAETKTLYPLMNVDDLYGTLYVPHDGT
MDPAGTCTTLARAASARGAQVIENCPVTGIRVWTDDFGVRRVAGVETQHGSIQTPCVVNCAGVWASAVGR
MAGVKVPLVAMHHAYVVTERIEGIQNMPNVRDHDASVYLRLQGDALSVGGYEANPIFWEEVSDKFAFGLF
DLDWEVFTQHIEGAINRVPVLEKTGIKSTVCGPESFTPDHKPLMGEAPELRGFFLGCGFNSAGMMLGGGC
GQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRWIRERSHESYAKNYSVVFPHDEPLAGRNMRRDPLHE
ELLGQGCVFQERHGWERPGWFHPRGPAPVLEYDYYGAYGSRAHEDYAYRRLLADEYTFAFPPHHDTIKKE
CLACRGAAAVFDMSYFGKFYLVGLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSH
QASPLAPAFEGDGYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDA
DLSNEAFPFSTHKLLRAAGHLVRAMRLSFVGELGWELHIPKASCVPVYRAVMAAGAKHGLINAGYRAIDS
LSIEKGYRHWHADLRPDDSPLEAGLAFTCKLKSPVPFLGREALEQQRAAGLRRRLVCFTMEDKVPMFGLE
AIWRNGQVVGHVRRADFGFAIDKTIAYGYIHDPSGGPVSLDFVKSGDYALERMGVTYGAQAHLKSPFDPN
NKRVKGIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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