NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS30236.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30236.1 Public Mus musculus X Mpp1 23 108 98 CCDS HistoryNCBI Gene:17524Re-query CCDS DB by CCDS ID:30236.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30236.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033775.8 ENSMUSP00000033775.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033775.8Link to Ensembl Protein Viewer:ENSMUSP00000033775.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000033775Re-query CCDS DB by Protein ID:ENSMUSP00000033775
Original member Current member NCBI NM_008621.3 NP_032647.1 Accepted alive Link to Nucleotide Sequence:NM_008621.3Link to Protein Sequence:NP_032647.1Re-query CCDS DB by Nucleotide ID:NM_008621Re-query CCDS DB by Protein ID:NP_032647Link to BLAST:NP_032647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032647.1 466 P70290 466 100% 0 0

Chromosomal Locations for CCDS 30236.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 75110667 75110843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75111927 75112001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75112199 75112401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75113586 75113666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75114234 75114314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75116056 75116162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75117756 75117952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75121435 75121503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75123896 75123981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75125371 75125449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75125737 75125880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 75130725 75130826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1401 nt):
ATGACGCTCAAGTCGAGCGAAGGCGAGGGAGGGAACAGCATGCGCACCGCACTTTCGGACCTCTACCTGG
AGCACTTACTACAGAAGCGTAACCGACCTGAGACTTCATTGAACCAGTCAAATGTTACTACTGAGGACAT
GTACACCAATGGGTCCCCTGCTCCAGGTAGCCCTGCCCATGCCAAAGGTCAGGAGGCTCGGAGAGTTCGT
CTCATACAATTTGAGAAGATCACAGAAGAGCCCATGGGGATCACTTTGAAGCTGAATGAAAAACAGTCGT
GTACCGTGGCCAGAATTCTCCATGGCGGCATGATTCATAGACAAGGCTCCCTTCATGTTGGGGATGAGAT
CCTAGAAATCAATGGCACAAATGTGACTAATCACTCAGTAGATCAGTTGCAGAAGGCAATGAAGGAAACC
AAAGGAATGATCTCATTAAAAGTCATTGCTAATCAGCAGAGTCGCCTTCCTGCGCTACAGATGTTCATGA
GAGCACAGTTTGACTATGATCCCCAAAAGGACAACCTTATTCCTTGCAAGGAGGCAGGACTGAAGTTTGT
TACTGGAGACATTATCCAGATAATCAACAAAGATGACAGCAATTGGTGGCAGGGGCGGGTGGAGGGCTCC
TCCAAAGAGTCTGCAGGATTAATCCCTTCTCCTGAGCTACAGGAATGGAGAGTGGCAAGCGTGGCTCACT
CTGCTCCAAGTGAAGCACCAAGTTGCAGTCCCTTTGGGAAGAAGAAGAAGTGTAAAGACAAGTACCTGGC
TAAGCACAGTTCCATTTTTGACCAGTTGGATGTTGTTTCCTATGAGGAAGTTGTTCGGCTCCCTGCATTC
AAGAGGAAGACCTTGGTGTTGATCGGAGCCAGTGGGGTGGGTCGTAGCCATATTAAGAATGGTCTGCTCA
GTCACAATCCAGAGAAGTTTGCGTACCCTGCCCCATATACAACACGGCCACCAAAGAAGAGTGAGGAAGA
TGGGAAGGAGTATCATTTCATCTCAACAGAGGAGATGACGAAGAACATCTCTGCCAATGAGTTCTTGGAG
TTTGGCAGCTATCAGGGCAACATGTTTGGCACCAAATTTGAAACAGTGCACCAGATTCATAAGCAGGACA
AGATTGCCATCCTTGACATTGAGCCCCAGACCCTAAAGACTGTTCGGACAGCTGAGCTTTCACCTTTCAT
TGTGTTCATCGCACCTACTGACCAGGGCACTCAGACTGAAGCCCTGCAGCAGCTGCAGAAGGACTCTGAG
GCCATCCGTAGTCAGTATGCTCATTACTTTGACCTCTCTTTGGTGAATAATAGTGTTGATGAAACTCTTA
AGAAATTGCAAGAAGCCTTTGACCAGGCTTGCAGTTCTCCACAGTGGGTGCCTGTCTCCTGGGTTTACTA
A

Translation (466 aa):
MTLKSSEGEGGNSMRTALSDLYLEHLLQKRNRPETSLNQSNVTTEDMYTNGSPAPGSPAHAKGQEARRVR
LIQFEKITEEPMGITLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET
KGMISLKVIANQQSRLPALQMFMRAQFDYDPQKDNLIPCKEAGLKFVTGDIIQIINKDDSNWWQGRVEGS
SKESAGLIPSPELQEWRVASVAHSAPSEAPSCSPFGKKKKCKDKYLAKHSSIFDQLDVVSYEEVVRLPAF
KRKTLVLIGASGVGRSHIKNGLLSHNPEKFAYPAPYTTRPPKKSEEDGKEYHFISTEEMTKNISANEFLE
FGSYQGNMFGTKFETVHQIHKQDKIAILDIEPQTLKTVRTAELSPFIVFIAPTDQGTQTEALQQLQKDSE
AIRSQYAHYFDLSLVNNSVDETLKKLQEAFDQACSSPQWVPVSWVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH