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Report for CCDS3130.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3130.1 Public Homo sapiens 3 DIPK2A 24 110 108 CCDS HistoryNCBI Gene:205428Re-query CCDS DB by CCDS ID:3130.1Re-query CCDS DB by GeneID:205428See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3130.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315691.8 ENSP00000320081.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000315691.8Link to Ensembl Protein Viewer:ENSP00000320081.4Re-query CCDS DB by Nucleotide ID:ENST00000315691Re-query CCDS DB by Protein ID:ENSP00000320081
Original member Current member NCBI NM_173552.5 NP_775823.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173552.5Link to Protein Sequence:NP_775823.1Re-query CCDS DB by Nucleotide ID:NM_173552Re-query CCDS DB by Protein ID:NP_775823Link to BLAST:NP_775823.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775823.1 430 Q8NDZ4-1 430 100% 0 0

Chromosomal Locations for CCDS 3130.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 143972333 143972989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 143985543 143985846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 143989510 143989841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGTGGCGCCTGGTGCCCCCGAAGCTGGGCCGCCTGTCCCGCTCGCTGAAGCTGGCGGCGCTGGGCAGCC
TGTTGGTGCTGATGGTGCTGCACTCGCCGTCGCTGCTCGCCTCTTGGCAGCGCAACGAACTGACCGACCG
GCGCTTCCTGCAGCTCAATAAGTGCCCGGCGTGCTTCGGCACGAGCTGGTGCCGCCGCTTCCTCAACGGG
CAGGTGGTATTCGAGGCGTGGGGCCGCTTGCGCCTGCTGGACTTCCTCAACGTGAAGAACGTGTACTTCG
CGCAGTACGGCGAGCCCCGCGAGGGCGGCCGCCGCCGAGTGGTGCTCAAGCGCCTCGGCTCGCAGCGCGA
GCTGGCGCAGCTCGACCAGAGCATCTGCAAGCGGGCCACCGGCCGGCCCCGCTGCGACCTGCTGCAGGCC
ATGCCCCGGACCGAGTTCGCGCGCCTCAACGGCGACGTGCGTCTGCTCACGCCCGAGGCGGTGGAGGGCT
GGTCGGACCTGGTGCACTGCCCCTCGCAGCGCCTTCTCGACCGCCTGGTGCGCCGCTACGCGGAGACCAA
GGACTCGGGCAGCTTCCTGCTTCGCAACCTCAAGGACTCGGAGCGCATGCAGCTGCTGCTGACCCTGGCC
TTCAACCCCGAGCCGCTGGTGCTACAGAGTTTTCCGTCTGATGAAGGTTGGCCATTTGCAAAGTATCTTG
GAGCTTGTGGAAGAATGGTGGCTGTAAATTATGTTGGAGAAGAACTGTGGAGTTACTTTAATGCGCCATG
GGAAAAACGAGTTGACCTCGCTTGGCAATTAATGGAAATAGCAGAACAGCTTACAAACAATGACTTTGAA
TTTGCACTCTACCTCCTGGACGTCAGCTTTGACAATTTTGCAGTTGGTCCTAGAGATGGGAAGGTAATCA
TTGTGGATGCTGAAAATGTTTTGGTTGCTGACAAAAGATTAATTAGACAAAATAAACCTGAAAATTGGGA
TGTATGGTATGAAAGCAAGTTTGATGACTGTGATAAGGAGGCTTGCTTATCATTTTCAAAAGAAATTCTT
TGTGCTCGTGCCACTGTGGACCACAATTACTATGCTGTTTGTCAGAACCTCTTATCCAGACATGCCACCT
GGCGTGGCACTTCTGGAGGACTCCTTCATGATCCACCAAGTGAAATTGCCAAAGATGGCCGGCTCGAGGC
CTTGCTGGATGAGTGTGCCAACCCAAAGAAGCGCTATGGCAGATTCCAGGCTGCAAAAGAACTGCGTGAA
TACCTAGCACAATTAAGTAACAACGTGAGGTAG

Translation (430 aa):
MWRLVPPKLGRLSRSLKLAALGSLLVLMVLHSPSLLASWQRNELTDRRFLQLNKCPACFGTSWCRRFLNG
QVVFEAWGRLRLLDFLNVKNVYFAQYGEPREGGRRRVVLKRLGSQRELAQLDQSICKRATGRPRCDLLQA
MPRTEFARLNGDVRLLTPEAVEGWSDLVHCPSQRLLDRLVRRYAETKDSGSFLLRNLKDSERMQLLLTLA
FNPEPLVLQSFPSDEGWPFAKYLGACGRMVAVNYVGEELWSYFNAPWEKRVDLAWQLMEIAEQLTNNDFE
FALYLLDVSFDNFAVGPRDGKVIIVDAENVLVADKRLIRQNKPENWDVWYESKFDDCDKEACLSFSKEIL
CARATVDHNYYAVCQNLLSRHATWRGTSGGLLHDPPSEIAKDGRLEALLDECANPKKRYGRFQAAKELRE
YLAQLSNNVR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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