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Report for CCDS41364.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41364.1 Public Homo sapiens 1 CFAP276 24 110 108 CCDS HistoryNCBI Gene:127003Re-query CCDS DB by CCDS ID:41364.1Re-query CCDS DB by GeneID:127003See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41364.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369949.8 ENSP00000358965.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369949.8Link to Ensembl Protein Viewer:ENSP00000358965.4Re-query CCDS DB by Nucleotide ID:ENST00000369949Re-query CCDS DB by Protein ID:ENSP00000358965
Original member Current member NCBI NM_001122961.3 NP_001116433.1 Accepted alive Link to Nucleotide Sequence:NM_001122961.3Link to Protein Sequence:NP_001116433.1Re-query CCDS DB by Nucleotide ID:NM_001122961Re-query CCDS DB by Protein ID:NP_001116433Link to BLAST:NP_001116433.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001116433.1 157 Q5T5A4-2 157 100% 0 0

Chromosomal Locations for CCDS 41364.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109106028 109106098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109106535 109106659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109107007 109107122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109107921 109108037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109113633 109113677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (474 nt):
ATGGAGAGATCACCCTCCAGACGTCGTCGCCTGGAAGAGGCCCCAAAATTGCCATATAAGAACCCAACAC
ACCTTGCTCAGCAGCAGGAACCCTGGAGTCGGCTCAACTCAACCCCCACAATTACTTCCATGAGGCGGGA
TGCCTACTATTTTGATCCCGAGATACCAAAGGATGACCTGGACTTCCGCTTAGCAGCCTTGTACAACCAC
CACACTGGGACATTCAAGAACAAAAGTGAGATACTGTTAAACCAGAAAACCACGCAGGATACCTATAGAA
CCAAGATCCAATTCCCTGGAGAATTTTTAACCCCTCCCACTCCACCCATCACTTTCCTGGCTAACATCAG
ACACTGGATCAACCCTAAAAAGGAGTCCATCCACAGCATCCAAGGATCCATAGTGTCCCCTCACACTGCA
GCCACCAATGGAGGCTACTCCCGAAAGAAAGATGGTGGCTTCTTCTCCACCTAG

Translation (157 aa):
MERSPSRRRRLEEAPKLPYKNPTHLAQQQEPWSRLNSTPTITSMRRDAYYFDPEIPKDDLDFRLAALYNH
HTGTFKNKSEILLNQKTTQDTYRTKIQFPGEFLTPPTPPITFLANIRHWINPKKESIHSIQGSIVSPHTA
ATNGGYSRKKDGGFFST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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