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Report for CCDS19985.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
19985.2 |
Public |
Mus musculus |
6 |
Plxna4 |
23 |
108 |
98 |
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Public Note for CCDS 19985.1 |
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data. |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 19985.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000115096.3 |
ENSMUSP00000110748.2 |
Accepted |
alive |
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NCBI |
NM_175750.3 |
NP_786926.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_786926.2 |
1893 |
Q80UG2 |
1893 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 19985.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5682 nt): ATGAAAGCCATGCCCTGGAACTGGACTTGCCTGCTCTCCCACCTGCTGGTGGTAGGGATGGGCTCCTCCA CTCTGCTTCCACGACAGCCACCCCAGCTGTCTCAGAAGCCTTCCTTTGTGACATTCCGAGGGGAGCCTGC TGAGGGCTTCAATCACCTTGTGGTGGATGAGAGGACAGGGCACATTTATTTGGGGGCTGTCAACAGAATC TACAAACTCTCTAGTGACCTCAAAGTCTTGGTGACTCATCAGACAGGGCCAGATGAGGACAACCCCAAGT GTTACCCACCTCGGATTGTTCAGACCTGCAATGAGCCTCTGGCCAGCACCAATAACGTCAACAAGATGCT GCTTATAGACTACAAAGAAAACAGGCTGATCGCGTGTGGGAGCCTGTACCAGGGTATCTGCAAGCTCCTG AGGCTAGAGGACCTCTTCAAGTTGGGAGAGCCCTTTCACAAGAAGGAACATTATCTCTCGGGGGTTAACG AGAGTGGCTCAGTCTTTGGGGTGATTGTTTCCTACAGCAACTTTGATGATAAACTCTTTATTGCCACAGC AGTGGATGGCAAACCTGAATATTTTCCTACCATCTCCAGCAGGAAGCTGACTAAGAACTCTGAGGCCGAT GGCATGTTTGCTTACGTTTTCCATGATGAATTTGTGGCCTCTATGATTAAGATCCCTTCAGACACTTTCA CGGTTATCCCCGACTTTGACATCTACTACGTCTATGGCTTCAGCAGTGGCAATTTTGTCTACTTTTTGAC CCTTCAGCCAGAGATGGTGTCTCCCCCAGGCTCCACGACAAAGGAGCAGGTGTACACCTCAAAGCTTGTG AGGCTTTGCAAAGAGGACACAGCCTTTAACTCCTACGTAGAGGTGCCCATTGGCTGTGAGCGCAATGGGG TGGAGTATCGCTTGTTACAGGCTGCCTACTTGTCTAAAGCTGGTGCAGTGCTTGGCCGGACCCTAGGAGT CCGCCCAGATGACGACCTCCTCTTCACCGTCTTCTCCAAGGGCCAGAAGCGGAAGATGAAATCTCTGGAT GAGTCTGCCCTGTGCATCTTCATCTTGAAGCAGATCAATGATCGCATTAAGGACCGCCTGCAGTCCTGTT ATAGGGGTGAGGGAACACTAGACCTGGCCTGGCTCAAGGTGAAGGACATCCCTTGCAGCAGTGCGCTCCT TACTATTGATGACAACTTCTGTGGCCTGGATATGAATGCTCCTCTGGGAGTTTCCGAAATGGTGCGTGGC ATTCCAGTCTTCACAGAAGACAGGGACCGCATGACTTCTGTCATCGCCTATGTCTACAAGAACCACTCAC TGGCCTTCGTGGGCACCAAAAGTGGCAAGCTGAAGAAGATCCGGGTTGATGGGCCCAAGGGAAATGCCCT CCAATATGAGACTGTGCAGGTGGTGGACTCAGGACCAGTCCTCCGGGACATGGCCTTTTCCAAGGACCAC GAGCAACTCTACATCATGTCAGAAAGGCAGCTTACCAGAGTTCCTGTGGAGTCCTGTGGGCAGTACCGGA GCTGTGGCGAGTGTCTTGGCTCAGGTGACCCCCATTGTGGCTGGTGTGTGCTCCACAACACGTGCACCCG GAAGGAACGGTGTGAACGCTCCAGAGAACCCCGAAGGTTTGCCTCAGAGATGAAGCAGTGTGTCCGGCTG ACGGTCCATCCCAACAACATCTCTGTCTCTCAGTACAACGTGCTGCTGGTCCTAGAGACATACAATGTCC CGGAGCTGTCAGCAGGTGTCAACTGTACCTTTGAAGATCTGTCAGAGATGGATGGGCTGGTAATAGGCAA TCAGATCCAGTGCTACTCCCCTGCAGCCAAGGAAGTGCCCCGGATCATCACAGAAAATGGGGACCATCAT GTTGTCCAGCTGCAACTCAAGTCAAAGGAGACTGGGATGACCTTCGCCAGCACCAGCTTTGTCTTCTACA ACTGCAGTGTCCACAATTCATGCCTGTCCTGTGTGGAGAGCCCGTACCGTTGCCACTGGTGTAAATACCG GCATGTTTGTACTCACGACCCCAACACATGCTCCTTCCAGGAAGGCCGAGTGAAGCTACCTGAGGACTGC CCCCAGCTGCTGCGAGTGGACAAGATCCTCGTTCCAGTAGAGGTGATCAAGCCCATCACTCTGAAGGCTA AGAACCTCCCACAGCCTCAGTCGGGACAGAGAGGCTACGAGTGCATCTTGAACATCCAGGGCATCGAGCA GAGGGTACCTGCTCTGCGCTTCAACAGCTCCAGTGTGCAGTGTCAGAACACCTCCTATTCCTATGAAGGA ATGGAGATCAACAACCTGCCAGTGGAGTTGACAGTCGTGTGGAATGGACACTTCAACATTGACAACCCAG CTCAGAATAAAGTTTACCTCTACAAGTGTGGAGCCATGCGCGAGAGCTGTGGGCTGTGCCTCAAGGCCGA CCCGGATTTCGAGTGTGGCTGGTGTCAGAGCCCAGGCCAGTGTACCCTGCGCCAGCACTGCCCTGCCCAT GAGAGCCGGTGGTTGGAACTGTCGGGGGCCAACAGCAAGTGCACCAACCCTCGTATCACAGAGATCATCC CAGTGACGGGCCCTCGAGAAGGGGGCACCAAGGTCACCATCCGAGGGGAGAACTTGGGCCTGGAATTCCG TGACATTGCATCACACGTGAAAGTGGCTGGTGTGGAATGCAGCCCCTTGGTGGATGGCTACATCCCAGCT GAACAGATCGTGTGTGAGATGGGTGAGGCCAAGCCTAGCCAGCATGCAGGCTTTGTGGAGATCTGTGTGG CTGTGTGTCGGCCTGAGTTCATGGCCCGCTCTTCGCAGCTCTATTACTTCATGACTCTGACCCTCGCAGA TCTGAAGCCCAACCGAGGACCCATGTCTGGGGGGACACAGGTTACCATCACAGGTACCAACTTGAATGCA GGCAGCAATGTTGTGGTGATGTTCGGGAGCCAGCCCTGCCTCTTCCACAGGCGCTCTCCATCCTACATTA TCTGTAACACTACATCCTCAGAGGAGGTGCTGGACATGAAGGTGACTGTGCAGGTGGACAGGGCCAGGAT CCGCCAGGACCTGGTCTTTCAGTACGTGGAGGACCCCACCATTGTGCGGATTGAACCAGAATGGAGCATT GTCAGTGGGAACACACCTATTGCTGTCTGGGGAACTCACCTGGACCTCATACAGAACCCACAGATCCGTG CCAAGCATGGAGGAAAAGAACACATCAACATCTGTGAGGTCCTAAATGCTACAGAGATGACCTGCCAGGC TCCAGCCCTTGCCCTGGGTCCCGACCACCAGTCAGATCTCACTGAGAGGCCTGAAGAATTTGGTTTCATC CTGGACAATGTCCAGTCTCTGCTAATTCTCAACAAGACCAACTTCACCTATTATCCTAACCCCGTGTTTG AGGCTTTCAGTCCCTCGGGAATCCTGGAGCTCAAGCCGGGCACCCCCATTATCCTAAAGGGCAAGAACTT GATCCCGCCTGTGGCCGGAGGCAATGTGAAGCTGAACTACACCGTGCTGGTTGGGGAGAAACCATGCACC GTGACAGTATCAGATGTGCAGCTGCTCTGCGAGTCTCCCAACCTCATCGGCAGGCACAAAGTGATGGCAC GGGTGGGTGGCATGGAGTATTCCCCTGGGATGGTATACATCGCCCCAGACAGCCCGCTCAGCCTGCCCGC CATTGTCAGCATCGCGGTGGCTGGTGGCCTCCTCATCATCTTCATCGTGGCCGTACTCATCGCCTACAAA CGCAAATCCCGAGAAAGTGACCTCACGCTGAAGAGGTTGCAGATGCAGATGGACAACCTTGAGTCCCGTG TGGCGCTGGAGTGCAAGGAAGCTTTTGCCGAGCTGCAGACAGATATCCATGAGCTTACCAGTGACCTGGA TGGAGCTGGGATTCCCTTTCTGGACTACAGAACCTATACCATGCGGGTGCTGTTCCCAGGGATTGAAGAC CACCCTGTGCTACGAGACCTTGAGGTCCCAGGCTACCGGCAGGAGCGTGTGGAGAAAGGACTCAAGCTCT TCGCCCAGCTCATCAACAACAAGGTGTTCCTGCTCTCTTTCATCCGCACTCTGGAGTCTCAGCGCAGTTT TTCCATGCGCGACCGAGGTAACGTGGCCTCCCTCATCATGACGGTACTTCAGAGCAAGCTAGAGTATGCC ACTGACGTGCTGAAGCAGCTACTGGCTGACCTCATTGATAAGAACCTGGAGAGCAAGAACCACCCCAAGC TGCTGCTCAGGAGGACGGAGTCGGTGGCCGAGAAGATGTTGACTAATTGGTTCACTTTCCTCCTCTACAA GTTCCTCAAGGAGTGTGCTGGGGAGCCACTCTTCTCCCTGTTCTGTGCCATCAAGCAGCAGATGGAGAAG GGCCCCATTGATGCCATCACCGGAGAGGCCCGCTACTCGCTAAGTGAGGACAAACTCATCCGACAGCAGA TTGAATATAAAACCTTGGTCCTGAGCTGTGTCAGTCCAGATAATGTTAACAGCCCAGAGGTCCCAGTGAA GATCCTCAACTGTGACACCATCACTCAGGTCAAAGAGAAGATCCTAGATGCCATCTTCAAGAATGTCCCG TGCTCCCATAGGCCCAAAGCTGCAGACATGGATCTAGAGTGGCGACAAGGAAGTGGGGCGAGGATGATCC TGCAGGACGAAGATATCACCACCAAGATCGAGAATGATTGGAAGAGACTCAACACAGTAGCCCACTACCA GGTACCAGATGGTTCTGTGGTGGCTTTAGTGTCCAAGCAAGTGACAGCCTACAATGCAGTGAACAACTCC ACTGTCTCCAGGACTTCAGCAAGTAAATATGAGAACATGATCCGGTACACAGGCAGCCCTGACAGCCTCC GTTCCCGGACACCCATGATCACCCCTGACCTGGAAAGCGGGGTCAAGCTTTGGCATCTGGTGAAGAACCA TGAACATGGAGACCAGAAGGAGGGGGACCGGGGGAGCAAGATGGTGTCTGAGATCTATCTGACACGACTA TTGGCCACAAAGGGCACACTGCAGAAGTTTGTGGATGACCTATTCGAGACCATCTTCAGTACGGCCCACC GTGGCTCCGCTCTGCCGCTAGCCATCAAGTACATGTTTGACTTCCTCGATGAGCAGGCTGATAAGCACGG CATCCATGACCCGCACGTCCGCCACACCTGGAAGAGCAACTGCCTGCCCCTACGGTTTTGGGTGAATATG ATCAAGAACCCTCAGTTTGTGTTTGACATCCATAAGAACAGCATCACGGATGCCTGTCTCTCTGTGGTGG CCCAGACCTTCATGGACTCCTGCTCCACTTCGGAGCACCGACTGGGCAAGGATTCCCCCTCCAACAAGCT GCTCTATGCCAAGGACATCCCCAGCTACAAGAACTGGGTAGAGAGGTATTATTCAGACATTGGGAAGATG CCGGCAATAAGTGACCAGGACATGAATGCATACCTGGCCGAGCAGTCGCGGATGCACATGAATGAGTTCA ATACGATGAGTGCGCTCTCAGAGATCTTCTCCTATGTGGGCAAATACAGTGAGGAGATCCTTGGACCCCT GGACCATGATGACCAGTGTGGAAAGCAGAAACTGGCTTACAAACTAGAACAAGTCATAACTCTCATGAGC TTAGACAGCTGA
Translation (1893 aa): MKAMPWNWTCLLSHLLVVGMGSSTLLPRQPPQLSQKPSFVTFRGEPAEGFNHLVVDERTGHIYLGAVNRI YKLSSDLKVLVTHQTGPDEDNPKCYPPRIVQTCNEPLASTNNVNKMLLIDYKENRLIACGSLYQGICKLL RLEDLFKLGEPFHKKEHYLSGVNESGSVFGVIVSYSNFDDKLFIATAVDGKPEYFPTISSRKLTKNSEAD GMFAYVFHDEFVASMIKIPSDTFTVIPDFDIYYVYGFSSGNFVYFLTLQPEMVSPPGSTTKEQVYTSKLV RLCKEDTAFNSYVEVPIGCERNGVEYRLLQAAYLSKAGAVLGRTLGVRPDDDLLFTVFSKGQKRKMKSLD ESALCIFILKQINDRIKDRLQSCYRGEGTLDLAWLKVKDIPCSSALLTIDDNFCGLDMNAPLGVSEMVRG IPVFTEDRDRMTSVIAYVYKNHSLAFVGTKSGKLKKIRVDGPKGNALQYETVQVVDSGPVLRDMAFSKDH EQLYIMSERQLTRVPVESCGQYRSCGECLGSGDPHCGWCVLHNTCTRKERCERSREPRRFASEMKQCVRL TVHPNNISVSQYNVLLVLETYNVPELSAGVNCTFEDLSEMDGLVIGNQIQCYSPAAKEVPRIITENGDHH VVQLQLKSKETGMTFASTSFVFYNCSVHNSCLSCVESPYRCHWCKYRHVCTHDPNTCSFQEGRVKLPEDC PQLLRVDKILVPVEVIKPITLKAKNLPQPQSGQRGYECILNIQGIEQRVPALRFNSSSVQCQNTSYSYEG MEINNLPVELTVVWNGHFNIDNPAQNKVYLYKCGAMRESCGLCLKADPDFECGWCQSPGQCTLRQHCPAH ESRWLELSGANSKCTNPRITEIIPVTGPREGGTKVTIRGENLGLEFRDIASHVKVAGVECSPLVDGYIPA EQIVCEMGEAKPSQHAGFVEICVAVCRPEFMARSSQLYYFMTLTLADLKPNRGPMSGGTQVTITGTNLNA GSNVVVMFGSQPCLFHRRSPSYIICNTTSSEEVLDMKVTVQVDRARIRQDLVFQYVEDPTIVRIEPEWSI VSGNTPIAVWGTHLDLIQNPQIRAKHGGKEHINICEVLNATEMTCQAPALALGPDHQSDLTERPEEFGFI LDNVQSLLILNKTNFTYYPNPVFEAFSPSGILELKPGTPIILKGKNLIPPVAGGNVKLNYTVLVGEKPCT VTVSDVQLLCESPNLIGRHKVMARVGGMEYSPGMVYIAPDSPLSLPAIVSIAVAGGLLIIFIVAVLIAYK RKSRESDLTLKRLQMQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYTMRVLFPGIED HPVLRDLEVPGYRQERVEKGLKLFAQLINNKVFLLSFIRTLESQRSFSMRDRGNVASLIMTVLQSKLEYA TDVLKQLLADLIDKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFSLFCAIKQQMEK GPIDAITGEARYSLSEDKLIRQQIEYKTLVLSCVSPDNVNSPEVPVKILNCDTITQVKEKILDAIFKNVP CSHRPKAADMDLEWRQGSGARMILQDEDITTKIENDWKRLNTVAHYQVPDGSVVALVSKQVTAYNAVNNS TVSRTSASKYENMIRYTGSPDSLRSRTPMITPDLESGVKLWHLVKNHEHGDQKEGDRGSKMVSEIYLTRL LATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHGIHDPHVRHTWKSNCLPLRFWVNM IKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKM PAISDQDMNAYLAEQSRMHMNEFNTMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMS LDS
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