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Report for CCDS26034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26034.1 Public Mus musculus 12 Acot2 23 108 98 CCDS HistoryNCBI Gene:171210Re-query CCDS DB by CCDS ID:26034.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26034.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021649.7 ENSMUSP00000021649.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021649.7Link to Ensembl Protein Viewer:ENSMUSP00000021649.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000021649Re-query CCDS DB by Protein ID:ENSMUSP00000021649
Original member Current member NCBI NM_134188.3 NP_598949.3 Accepted alive Link to Nucleotide Sequence:NM_134188.3Link to Protein Sequence:NP_598949.3Re-query CCDS DB by Nucleotide ID:NM_134188Re-query CCDS DB by Protein ID:NP_598949Link to BLAST:NP_598949.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598949.3 453 Q9QYR9 453 100% 0 0

Chromosomal Locations for CCDS 26034.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 83987902 83988481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 83990494 83990696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 83992502 83993080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1362 nt):
ATGGTGGCCTCGTCTTTCGCTGTCCTGAGAGCAAGCAGGTTGTGCCAACAGGATTGGAAGAGCTGGGCGC
GGCTGTTTGTACCTCCGCCGCTCAGCACTGGTGGCCGGACCACTTGGGCGCGGACAAATGCGACGCTGAG
CGTAGAGCCCGAGGGCCGCAGCTGCTGGGACGAGCCGCTGAGCATCGCCGTGCGCGGCCTGGCCCCCGAG
CAGCCCGTCACGCTGCGCTCTGCCTTGCGCGACGAGAAGGGCGCGCTCTTCCGAGCCCACGCGCGCTACC
GCGCCGACGCTGGCGGCGAGCTGAACCTGGCGCGCGCGCCCGCGCTGGGCGGCAGCTTCTCGGGGCTCGA
GCCCATGGGGCTGCTCTGGGCCATGGAGCCCGAACGGCCTCTCTGGCGCCTGATCAAGCGCGACGTGCAG
ACGCCCTTCTTGGTGGAGCTGGAGGTGCTGGACGGACACGAGCCCGATGGCGGGCAGCGGCTGGCGCAGG
CGGTGCACGAGCGTCACTTCTTGGCTCCCGGGGTGCGGCGCGTGCCCGTACGAGAGGGCCGGGTGCGCGC
CACGCTCTTCCTGCCCCCAGAACCTGGACCCTTTCCTGGGATCATAGACCTTTTTGGAGTTGGAGGTGGC
CTTCTGGAGTATCGGGCGAGCCTGCTGGCTGGGAAGGGCTTTGCCGTGATGGCTCTGGCTTATTACAACT
ACGACGACCTCCCCAAGAGCATAGAAACCATGCACATGGAGTACTTTGAAGAAGCCGTGAACTACCTGCG
CAGCCACCCCGAGGTAAAAGGACCTGGAATTGGGCTGCTTGGGATTTCCAAAGGGGGTGAACTTGGCCTT
GCTATGGCCTCCTTCCTGAAGGGCATCACAGCTGCTGTGGTCATCAATGGCTCCGTGGCTGCTGTTGGGA
ACACCATCTCCTACAAGGATGAGACTATACCCCCTGTGTCCCTTCTGAGAAACCAAGTCAAAATGACCAA
AGATGGTCTCTTGGATGTCGTGGAAGCTCTGCAAAGCCCTCTGGTAGACAAGAAGAGCTTCATTCCCGTG
GAAAGGTCTGACACGACCTTCCTGTTCCTCGTAGGTCAGGACGACCACAACTGGAAGAGCGAGTTCTATG
CTGATGAGATCTCCAAACGCCTGCAGGCGCACGGGAAGGAGAAGCCCCAGATCATCTGCTACCCAGCAGC
AGGGCATTACATCGAGCCCCCTTACTTCCCGCTGTGCAGCGCTGGCATGCACCTCCTGGTGGGTGCCAAC
ATCACCTTTGGAGGGGAGCCCAGGGCTCATGCCGTGGCCCAGGTGGACGCATGGCAGCAGCTCCAGACTT
TCTTCCACAAACAGTTGGGTAGCAAGAGTTAG

Translation (453 aa):
MVASSFAVLRASRLCQQDWKSWARLFVPPPLSTGGRTTWARTNATLSVEPEGRSCWDEPLSIAVRGLAPE
QPVTLRSALRDEKGALFRAHARYRADAGGELNLARAPALGGSFSGLEPMGLLWAMEPERPLWRLIKRDVQ
TPFLVELEVLDGHEPDGGQRLAQAVHERHFLAPGVRRVPVREGRVRATLFLPPEPGPFPGIIDLFGVGGG
LLEYRASLLAGKGFAVMALAYYNYDDLPKSIETMHMEYFEEAVNYLRSHPEVKGPGIGLLGISKGGELGL
AMASFLKGITAAVVINGSVAAVGNTISYKDETIPPVSLLRNQVKMTKDGLLDVVEALQSPLVDKKSFIPV
ERSDTTFLFLVGQDDHNWKSEFYADEISKRLQAHGKEKPQIICYPAAGHYIEPPYFPLCSAGMHLLVGAN
ITFGGEPRAHAVAQVDAWQQLQTFFHKQLGSKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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