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Report for CCDS32979.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32979.1 Public Homo sapiens 19 ZNF431 24 110 108 CCDS HistoryNCBI Gene:170959Re-query CCDS DB by CCDS ID:32979.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32979.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311048.11 ENSP00000308578.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311048.11Link to Ensembl Protein Viewer:ENSP00000308578.6Re-query CCDS DB by Nucleotide ID:ENST00000311048Re-query CCDS DB by Protein ID:ENSP00000308578
Original member Current member NCBI NM_133473.4 NP_597730.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133473.4Link to Protein Sequence:NP_597730.2Re-query CCDS DB by Nucleotide ID:NM_133473Re-query CCDS DB by Protein ID:NP_597730Link to BLAST:NP_597730.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_597730.2 576 Q8TF32 576 100% 0 0

Chromosomal Locations for CCDS 32979.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21142184 21142186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21143551 21143643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21166335 21166461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21167571 21167666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21182623 21184034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1731 nt):
ATGGACGACTTGAAATATGGAGTGTATCCTCTCAAGGAAGCAAGTGGATGCCCTGGGGCTGAGAGGAATC
TTCTAGTTTACTCTTATTTTGAAAAGGAGACATTGACATTTAGGGATGTGGCCATAGAATTCTCTCTGGA
GGAGTGGGAATGCCTGAACCCTGCTCAGCAGAATTTATATATGAATGTGATGTTAGAAAACTACAAAAAC
CTGGTCTTCTTGGGTGTTGCTGTCTCTAAGCAAGACCCAGTCACCTGTCTGGAGCAAGAAAAAGAGCCCT
GGAATATGAAGAGACATGAGATGGTGGATGAACCCCCAGCTATGTGTTCTTATTTTACCAAAGACCTTTG
GCCAGAGCAAGACATAAAAGATTCTTTTCAACAAGTAATACTGAGAAGATATGGCAAATGTGAACATGAG
AATTTACAGTTAAGAAAAGGCTCCGCAAGTGTAGATGAGTATAAGGTGCACAAAGAAGGTTATAATGAGC
TAAACCAGTGTTTGACAACTACCCAGAGCAAAATATTTCCATGTGATAAATATGTGAAAGTCTTTCATAA
ATTTTTAAATGCAAATAGACATAAGACAAGACATACTGGAAAGAAACCTTTCAAATGTAAAAAATGTGGC
AAATCATTTTGCATGCTTTTACACCTAAGTCAACATAAAAGAATTCATATTAGAGAGAATTCTTACCAAT
GTGAAGAATGTGGCAAAGCTTTTAAATGGTTCTCAACCCTTACTAGACACAAGAGAATTCATACTGGAGA
GAAACCCTTCAAATGTGAAGAATGTGGCAAAGCTTTTAAGCAGTCCTCAACCCTTACTACACATAAGATA
ATTCATACTGGGGAGAAACCATATAGATGTGAAGAATGTGGCAAAGCCTTCAACCGGTCCTCACACCTTA
CTACACATAAGATAATTCATACTGGAGAGAAGCCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCA
GTCTTCAACCCTTAGTACACATAAGTTCATTCATGCTGGAGAGAAACCCTACAAATGTGAGGAATGTGAC
AAAGCTTTTAATCGATTCTCATACCTTACTAAACATAAGATAATTCATACTGGAGAAAAATCTTACAAAT
GTGAAGAATGTGGCAAAGGCTTTAATTGGTCCTCAACCCTTACTAAACATAAAAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGTGTGTGGCAAAGCCTTTAATGAGTCCTCAAACCTTACTACACATAAGATG
ATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCCCACAACTTA
CTGCACATAAGATAATTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCA
GTCATCAATCCTTACTACACATAAGAGAATTCACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGC
AAAGCTTTTAACCGATCCTCAAATCTTACTAAACATAAGATAATTCATACAGGAGAGAAATCTTACAAAT
GTGAAGAATGTGGTAAAGCCTTTAACCAATCCTCAACTCTTACTAAACATAGGAAAATTCATACTAGACA
GAAACCCTACAACTGTGAAGAATGTGACAATACATTTAACCAGTCCTCAAACCTTATTAAACAAAATAAT
TCATACTGGAGAGAAACTCTACAAATGTCAAGAATGTGGGAAAGCCTTTAA

Translation (576 aa):
MDDLKYGVYPLKEASGCPGAERNLLVYSYFEKETLTFRDVAIEFSLEEWECLNPAQQNLYMNVMLENYKN
LVFLGVAVSKQDPVTCLEQEKEPWNMKRHEMVDEPPAMCSYFTKDLWPEQDIKDSFQQVILRRYGKCEHE
NLQLRKGSASVDEYKVHKEGYNELNQCLTTTQSKIFPCDKYVKVFHKFLNANRHKTRHTGKKPFKCKKCG
KSFCMLLHLSQHKRIHIRENSYQCEECGKAFKWFSTLTRHKRIHTGEKPFKCEECGKAFKQSSTLTTHKI
IHTGEKPYRCEECGKAFNRSSHLTTHKIIHTGEKPYKCEECGKAFNQSSTLSTHKFIHAGEKPYKCEECD
KAFNRFSYLTKHKIIHTGEKSYKCEECGKGFNWSSTLTKHKRIHTGEKPYKCEVCGKAFNESSNLTTHKM
IHTGEKPYKCEECGKAFNRSPQLTAHKIIHTGEKPYKCEECGKAFSQSSILTTHKRIHTGEKPYKCEECG
KAFNRSSNLTKHKIIHTGEKSYKCEECGKAFNQSSTLTKHRKIHTRQKPYNCEECDNTFNQSSNLIKQNN
SYWRETLQMSRMWESL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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