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Report for CCDS35991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35991.1 Public Mus musculus 10 Zbtb7a 23 108 98 CCDS HistoryNCBI Gene:16969Re-query CCDS DB by CCDS ID:35991.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35991.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048128.14 ENSMUSP00000047333.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048128.14Link to Ensembl Protein Viewer:ENSMUSP00000047333.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000048128Re-query CCDS DB by Protein ID:ENSMUSP00000047333
Original member Current member EBI ENSMUST00000117956.1 ENSMUSP00000113428.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000117956.1Link to Ensembl Protein Viewer:ENSMUSP00000113428.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000117956Re-query CCDS DB by Protein ID:ENSMUSP00000113428
Original member Current member EBI ENSMUST00000119606.7 ENSMUSP00000113612.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119606.7Link to Ensembl Protein Viewer:ENSMUSP00000113612.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119606Re-query CCDS DB by Protein ID:ENSMUSP00000113612
Original member NCBI NM_010731.3 NP_034861.3 Updated not alive Link to Nucleotide Sequence:NM_010731.3Link to Protein Sequence:NP_034861.3Re-query CCDS DB by Nucleotide ID:NM_010731Re-query CCDS DB by Protein ID:NP_034861
Current member NCBI NM_010731.4 NP_034861.3 Accepted alive Link to Nucleotide Sequence:NM_010731.4Link to Protein Sequence:NP_034861.3Re-query CCDS DB by Nucleotide ID:NM_010731Re-query CCDS DB by Protein ID:NP_034861Link to BLAST:NP_034861.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034861.3 569 O88939-1 569 100% 0 0

Chromosomal Locations for CCDS 35991.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81143974 81145217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81147970 81148435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGGCTGGCGGCGTGGACGGCCCCATCGGGATCCCGTTCCCGGACCACAGCAGCGACATCCTGAGCGGCC
TGAACGAGCAGCGGACTCAGGGGCTGCTTTGCGACGTGGTGATTCTTGTGGAAGGACGTGAGTTCCCCAC
GCACCGCTCGGTGCTGGCCGCCTGCAGCCAGTACTTCAAGAAGCTGTTCACGTCGGGAGCTGTAGTGGAC
CAGCAGAACGTGTACGAGATCGACTTCGTGAGTGCCGAGGCACTGACGGCGCTCATGGACTTCGCCTACA
CCGCCACGCTCACGGTCAGCACGGCCAATGTGGGCGACATCCTGAGTGCAGCACGGCTGCTGGAGATCCC
GGCCGTGAGCCACGTGTGCGCCGACCTGCTGGAGCGTCAGATTCTGGCGGCTGATGATGTGGGCGACGCG
AGCCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCT
TCCGCAGTAACCCCATGAATAGCCTGCCCCCCACTGCCTTCCCATGGTCTGGCTTCGGTGCCCCCGACGA
CGACCTGGACGCCACCAAGGAGGCTGTGGCCGCCGCTGTGGCCGCTGTGGCCGCAGGCGACTGCAATGGC
TTGGACTTCTATGGCCCAGGGCCCCCGGCTGATCGGCCCCCAGCCGGCGATGGAGATGAGGGTGACAGTA
CCCCAGGGCTGTGGCCTGAGAGAGATGAAGATGCCCCGCCCGGAGGGCTCTTCCCACCTCCTACTGCCCC
ACCGGCCACCACACAGAACGGCCACTATGGCCGTGCAGGGGCTGGCACCGGTGAAGAAGAAGCGGCGGCT
CTCTCTGAGGCCGCTCCAGAGCCGGGCGACTCCCCGGGCTTCCTGTCAGGCGCTGCAGAGGGCGAGGATG
GGGACGCCGCTGATGTGGATGGGCTAGCGGCCAGCACGCTGCTACAGCAGATGATGTCATCGGTGGGCCG
GGCCGGGGACAGTGATGAGGAGTCGCGAACCGACGACAAGGGCGTCATGGACTACTACCTGAAGTACTTC
AGTGGAGCCCACGAGGGGGATGTGTACCCAGCCTGGTCACAGAAGGGTGAGAAGAAAATCCGGGCCAAGG
CCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGATTCAGGGTGCCGGCAAGCTGCCCCGTCACATCCGCAC
GCACACGGGCGAGAAGCCCTACGAGTGTAACATCTGTAAAGTTCGATTCACCAGACAGGACAAGCTGAAG
GTGCACATGCGGAAGCACACGGGTGAGAAGCCGTACCTGTGCCAGCAGTGCGGCGCCGCCTTCGCGCACA
ACTACGACCTGAAGAACCACATGCGGGTGCACACGGGGCTGCGGCCATACCAGTGCGATAGCTGCTGCAA
GACCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGGGGTCCCCTCGCGC
CGCGGCCGCAAGCCCCGTGTGCGGGGTGTGCCACCCGATGTCCCTGCCGGGGCCGGCGCACCCCCCGGGC
TCCCGGACGCCCCGCGCAATGGCCAGGAGAAGCACTTTAAGGACGAGGAGGAGGACGAGGAGGAGGCCAG
CCCGGACGGCTCAGGCCGCCTGAATGTAGCGGGCAGCGGAGGAGACGATGGTGCAGGTGGCCCGGCGGTG
GCCACCGCCGAGGGTAACTTCGCAACCTGA

Translation (569 aa):
MAGGVDGPIGIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD
QQNVYEIDFVSAEALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLERQILAADDVGDA
SQPDGAGPTDQRNLLRAKEYLEFFRSNPMNSLPPTAFPWSGFGAPDDDLDATKEAVAAAVAAVAAGDCNG
LDFYGPGPPADRPPAGDGDEGDSTPGLWPERDEDAPPGGLFPPPTAPPATTQNGHYGRAGAGTGEEEAAA
LSEAAPEPGDSPGFLSGAAEGEDGDAADVDGLAASTLLQQMMSSVGRAGDSDEESRTDDKGVMDYYLKYF
SGAHEGDVYPAWSQKGEKKIRAKAFQKCPICEKVIQGAGKLPRHIRTHTGEKPYECNICKVRFTRQDKLK
VHMRKHTGEKPYLCQQCGAAFAHNYDLKNHMRVHTGLRPYQCDSCCKTFVRSDHLHRHLKKDGCNGVPSR
RGRKPRVRGVPPDVPAGAGAPPGLPDAPRNGQEKHFKDEEEDEEEASPDGSGRLNVAGSGGDDGAGGPAV
ATAEGNFAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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