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Report for CCDS21783.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21783.1 Public Mus musculus 7 Acsm1 23 108 98 CCDS HistoryNCBI Gene:117147Re-query CCDS DB by CCDS ID:21783.1Re-query CCDS DB by GeneID:117147See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21783.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047929.12 ENSMUSP00000036140.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047929.12Link to Ensembl Protein Viewer:ENSMUSP00000036140.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000047929Re-query CCDS DB by Protein ID:ENSMUSP00000036140
Original member Current member NCBI NM_054094.6 NP_473435.1 Accepted alive Link to Nucleotide Sequence:NM_054094.6Link to Protein Sequence:NP_473435.1Re-query CCDS DB by Nucleotide ID:NM_054094Re-query CCDS DB by Protein ID:NP_473435Link to BLAST:NP_473435.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_473435.1 573 Q91VA0-1 573 100% 0 0

Chromosomal Locations for CCDS 21783.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 119622510 119622689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119633062 119633272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119636450 119636657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119638065 119638205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119640575 119640734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119652554 119652633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119654332 119654455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119655416 119655496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119655982 119656083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119658300 119658427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119659101 119659200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119660564 119660683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119662197 119662283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1722 nt):
ATGCAGTGGCTGAAGAGTTTCCAGATCTGCAAAGTCTTACAGGGCTTCTCCCTAAGCCCCACCCAGCTGC
ACAGACGGTTGTTTTCAAGAGTTGGAGCTCCAAGATGGAATGACCATGATTCACCTGAGGAGTTTAACTT
TGCAAGTGATGTCCTGGACTACTGGGCTCAAATGGAGGAGGAGGGCAAGAGAGGACCAAGTCCAGCCTTT
TGGTGGGTGAATGGCCAAGGAGATGAAATAAAGTGGAGCTTCAGGAAGCTGAGGGACCTCACCTGTCGCA
CTGCCAACGTCTTTGAGCAGATTTGTGGCCTGCAGCAAGGAGATCACCTGGCCTTGATTCTGCCCCGAGT
GCCCGAGTGGTGGTTGGTGACAGTGGGCTGCATGCGAACAGGGATCATCTTCATGCCTGGGACTACCCAA
CTGAAAGCCAAGGACATTCTCTACCGAATACAAATATCTCGAGCCAAAGCCATTGTGACCACAGCTAGCC
TTGTCCCAGAGGTGGAATCTGTGGCTTCTGAGTGTCCTGATCTGAAAACCAAGCTGGTGGTGTCTGATCA
CAGCCATGAAGGGTGGCTTGATTTCTGTTCACTGATTAAATCAGCATCCCCAGACCATACTTGTATTAAG
TCAAAGATGAAGGATCCCATGGCCATCTTCTTCACCAGTGGGACCACAGGCTACCCCAAGATGGCAAAGC
ACAACCAGGGACTTGCCTTCCGGTCATATATCCCTTCATGCAGAAAATTATTGAAGCTGAAGACATCTGA
CATCTTGTGGTGCATGTCAGACCCAGGATGGATTCTGGCTACCGTGGGGTGCCTGATCGAGCCATGGACA
TCAGGATGTACAGTCTTCATCCACCACCTCCCTCAATTCGACCCCAAAGTCATTGTAGAGGTACTGTTCA
AATACCCCATCACTCAGTGCCTTGCTGCCCCAGGCGTGTATCGAATGGTTCTTCAGCAGAAAACCTCCAA
CCTCAGGTTCCCCACCCTTGAGCATTGCACTACTGGTGGGGAGAGCCTGCTGCCTGAGGAGTATGAGCAG
TGGAAGCAAAGGACAGGTCTTTCCATCCACGAGGTCTATGGACAGTCAGAAACGGGGATCAGCAGTGCCA
CCCTCCGGGAAATGAAGATCAAGCGAGGCTCCATAGGGAAGGCCATCTTACCCTTTGACTTGCAGATCAT
CGATGAAAAGGGCAACATCCTCCCACCCAACACTGAAGGATACATTGGCATCAGGATCAAGCCCACCAGG
CCTCTAGGCCTCTTCATGGAATATGAGAATAGCCCAGAGAGCACATCTGAAGTGGAGTGTGGGGACTTTT
ACAATAGTGGGGATAGAGCGACCATTGATGAAGAGGGCTACATCTGGTTCTTGGGAAGGGGCGATGATGT
CATCAATGCTTCCGGGTATCGCATCGGGCCTGTAGAGGTGGAGAACGCCTTGGCGGAGCACCCAGCAGTG
GCAGAGTCTGCGGTGGTGAGCAGCCCGGACAAGGATCGAGGAGAGGTGGTGAAGGCGTTTATTGTCCTCA
ACCCAGAGTTCCTGTCACACGATCAGGAACAGCTTATCAAAGAGCTACAGCATCATGTGAAGTCAGTGAC
GGCACCATACAAGTACCCCAGGAAGGTGGAGTTTGTTTCAGAATTGCCCAAAACTGTCACAGGCAAAATC
AAAAGGAAGGAACTTCGAAACAAGGAGTTTGGTCAGCTATGA

Translation (573 aa):
MQWLKSFQICKVLQGFSLSPTQLHRRLFSRVGAPRWNDHDSPEEFNFASDVLDYWAQMEEEGKRGPSPAF
WWVNGQGDEIKWSFRKLRDLTCRTANVFEQICGLQQGDHLALILPRVPEWWLVTVGCMRTGIIFMPGTTQ
LKAKDILYRIQISRAKAIVTTASLVPEVESVASECPDLKTKLVVSDHSHEGWLDFCSLIKSASPDHTCIK
SKMKDPMAIFFTSGTTGYPKMAKHNQGLAFRSYIPSCRKLLKLKTSDILWCMSDPGWILATVGCLIEPWT
SGCTVFIHHLPQFDPKVIVEVLFKYPITQCLAAPGVYRMVLQQKTSNLRFPTLEHCTTGGESLLPEEYEQ
WKQRTGLSIHEVYGQSETGISSATLREMKIKRGSIGKAILPFDLQIIDEKGNILPPNTEGYIGIRIKPTR
PLGLFMEYENSPESTSEVECGDFYNSGDRATIDEEGYIWFLGRGDDVINASGYRIGPVEVENALAEHPAV
AESAVVSSPDKDRGEVVKAFIVLNPEFLSHDQEQLIKELQHHVKSVTAPYKYPRKVEFVSELPKTVTGKI
KRKELRNKEFGQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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