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Report for CCDS85584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85584.1 Public Mus musculus 8 Ces5a 23 108 98 CCDS HistoryNCBI Gene:67935Re-query CCDS DB by CCDS ID:85584.1Re-query CCDS DB by GeneID:67935See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85584.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000212009.1 ENSMUSP00000148481.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000212009.1Link to Ensembl Protein Viewer:ENSMUSP00000148481.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000212009Re-query CCDS DB by Protein ID:ENSMUSP00000148481
Original member Current member NCBI NM_001003951.3 NP_001003951.1 Accepted alive Link to Nucleotide Sequence:NM_001003951.3Link to Protein Sequence:NP_001003951.1Re-query CCDS DB by Nucleotide ID:NM_001003951Re-query CCDS DB by Protein ID:NP_001003951Link to BLAST:NP_001003951.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003951.1 575 Q6AW46 575 100% 0 0

Chromosomal Locations for CCDS 85584.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 93499378 93499609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93499688 93499760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93502178 93502327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93514195 93514342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93516905 93516973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93519504 93519644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93520970 93521074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93523124 93523228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93525546 93525699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93528501 93528634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93530759 93530897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93534508 93534712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93535635 93535707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGAGCGGGGACTGGGTGCGTCCAGGACAAGCCCTAATCTGGGTTATTTGGATCTTTGGAGCCATCATCG
AGGGGTCTGTGACTGAAGAGCCACATAGGTACACCAAGCTGGGATGGGTGCAGGGGAAGCAAGCCACCGT
GCTGGGAAGACTGGAACCCGTGAACGTGTTTCTTGGGATCCCCTTTGCTGCACCCCCTCTTGGACCTCTG
CGGTTTTCCAAGCCACAGCCTCCGATCCCCTGGGATAATTTGCGAGAAGCCACTGCCTATCCCAATTTGT
GCTTTCAGAACTTAGAGTGGTTATTCATATATCAAAACCTGCTCAAAGTAAGTTACCCTATACTTGGAAT
GTCAGAGGACTGCTTATACCTCAACATTTATGCACCATGCCATGCCAATAACGGCTCCAGTCTCCCGGTC
ATGGTGTGGATACCAGGTGGTGGCTTTGAGACTGGCTCAGCCTCCATCTTTGATGGCTCTGCCCTGGCTG
TCTATGAGGATGTGTTGGTTGTCACCATCCAGTACCGCCTAGGAATATTTGGCTTCTTCACCACACAGAA
CCAGCATGCCCCTGGGAATTGGGCCTTCTGGGACCAGCTGGCTGCCTTGCTGTGGGTCAGGGAGAACATC
AAGTACTTCGGTGGAAACCCTGACTCCGTGACCATCTTCGGTAACTCAGCGGGAGCCATAAGCATTTCTA
GCCTCATTCTGTCTCCTTTGAGTGCGGACTTATTCCACAGAGCCATCATGCAGAGTGGAGTGGCCATCAT
CCCCAGCCTGAAGAGCTCTGATAATGATCTGAAACATGATTTGCAGGTGGTTGCAAATGTTTGTGATTGC
AATGTATCAGACTCCAAGGCTTTGCTGAAGTGCCTGAGGGAAAAGTCTTCTTTGGAGTTGATGAGCCTTA
GCCAGAAAGCAAAATCATTCACTCGAGTGGTCGACGGTTCTTTCTTCTCCGAAGAACCACTAGAACTGTT
GTCTCAAAAGACATTGAAAATAGTACCTTCTATCATTGGAGTCAATAACCAGGAGTGTGGCTACATATTG
CCCGTGAGAGACACTCCTGAGATTCTCCTCGGCTCCAATGAGTCTACTGCTCTCACCTTGATACATACTT
TGCTGCATATCCCCACCCAGCATTTGTACATTGTGACTAAAGAGTACTTCCATGGCAAGCATTCTCCGAC
CGACATCCGAGACACTTTACTGGACTTGTTTGGAGATGTGTTCTTTGTGGTTCCCGGGCTGGTTACAGCT
CGATATCACAGAGATTCTGGTGGACCTGTCTATTTTTATGAGTTTCAGCACAGACCCCATTGCTTTCAAA
ACTCAAGGCCAGCCTTCGTGAAGGCTGACCACACAGACGAAATCCGCTTCGTTTTTGGAGGCCCTTTCCT
GAAGGGCGACGTGGTCATGTTTGAGGAAGCCACCGAGGAAGAGAAGTTGCTAAGCAGGAAGATGATGAAA
TACTGGGCTAACTTTGCCAGGAGCGGGGATCCTAACGGTGCCGACCTGCCTCCGTGGCCAGTCTATGATG
AGAATGAACAGTACCTGGAACTGGATGTGAACATCAGCACTGGGCGGAGACTGAAAGACCAGAGGGTGGA
GTTTTGGACAGACACCCTCCCCCTGATCCTGTCTGCTTCCAAAGCGCTGCTCAGTCCCACGTTCTCCTTA
ATCCTCCTATCACTACTGTCGCCTGTCCTTCTCTCCGCTGCTTCTTAG

Translation (575 aa):
MSGDWVRPGQALIWVIWIFGAIIEGSVTEEPHRYTKLGWVQGKQATVLGRLEPVNVFLGIPFAAPPLGPL
RFSKPQPPIPWDNLREATAYPNLCFQNLEWLFIYQNLLKVSYPILGMSEDCLYLNIYAPCHANNGSSLPV
MVWIPGGGFETGSASIFDGSALAVYEDVLVVTIQYRLGIFGFFTTQNQHAPGNWAFWDQLAALLWVRENI
KYFGGNPDSVTIFGNSAGAISISSLILSPLSADLFHRAIMQSGVAIIPSLKSSDNDLKHDLQVVANVCDC
NVSDSKALLKCLREKSSLELMSLSQKAKSFTRVVDGSFFSEEPLELLSQKTLKIVPSIIGVNNQECGYIL
PVRDTPEILLGSNESTALTLIHTLLHIPTQHLYIVTKEYFHGKHSPTDIRDTLLDLFGDVFFVVPGLVTA
RYHRDSGGPVYFYEFQHRPHCFQNSRPAFVKADHTDEIRFVFGGPFLKGDVVMFEEATEEEKLLSRKMMK
YWANFARSGDPNGADLPPWPVYDENEQYLELDVNISTGRRLKDQRVEFWTDTLPLILSASKALLSPTFSL
ILLSLLSPVLLSAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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