NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21388.1 Public Mus musculus 7 Anpep 23 108 98 CCDS HistoryNCBI Gene:16790Re-query CCDS DB by CCDS ID:21388.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21388.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049004.7 ENSMUSP00000035943.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049004.7Link to Ensembl Protein Viewer:ENSMUSP00000035943.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000049004Re-query CCDS DB by Protein ID:ENSMUSP00000035943
Original member Current member EBI ENSMUST00000107392.7 ENSMUSP00000103015.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107392.7Link to Ensembl Protein Viewer:ENSMUSP00000103015.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000107392Re-query CCDS DB by Protein ID:ENSMUSP00000103015
Original member Current member NCBI NM_008486.3 NP_032512.2 Accepted alive Link to Nucleotide Sequence:NM_008486.3Link to Protein Sequence:NP_032512.2Re-query CCDS DB by Nucleotide ID:NM_008486Re-query CCDS DB by Protein ID:NP_032512Link to BLAST:NP_032512.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032512.2 966 P97449 966 100% 0 0

Chromosomal Locations for CCDS 21388.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 79822224 79822376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79825303 79825384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79825706 79825846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79826592 79826759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79826871 79826981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79827572 79827663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79833587 79833734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79835130 79835185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79835287 79835420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79835969 79836042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79836231 79836406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79838242 79838307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79838413 79838478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79838647 79838790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79838888 79839001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79839163 79839317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79839402 79839528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79840873 79841009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79841086 79841228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79841638 79842251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2901 nt):
ATGGCCAAGGGGTTCTACATTTCCAAGACCCTGGGCATCTTGGGCATCCTGTTGGGTGTGGCAGCTGTGT
GTACCATCATAGCTCTGTCGGTGGTCTACGCTCAGGAGAAGAATAGGAATGCAGAGAACTCTGCCACAGC
CCCCACGCTCCCGGGCAGCACCTCAGCCACCACCGCAACCACCACCCCTGCTGTAGATGAAAGCAAGCCT
TGGAACCAGTATCGCTTGCCTAAGACTCTTATACCTGACTCCTACCGGGTGATCCTGAGACCCTACCTCA
CCCCCAACAATCAGGGCCTGTACATCTTCCAAGGCAACAGTACTGTTCGCTTTACCTGCAACCAGACCAC
GGATGTCATTATCATCCACAGCAAAAAGCTCAACTACACCCTCAAAGGAAACCACAGGGTGGTGTTGCGA
ACCCTGGACGGCACTCCGGCACCTAACATTGACAAAACGGAACTGGTAGAGCGTACTGAGTACCTGGTGG
TGCACCTGCAGGGGTCCCTGGTAGAGGGCCGTCAGTACGAGATGGACAGCCAGTTCCAGGGGGAACTGGC
TGATGACCTGGCTGGCTTCTACCGCAGCGAGTACATGGAAGGAGACGTCAAGAAAGTGGTGGCTACAACG
CAGATGCAGGCTGCTGATGCTCGGAAATCCTTTCCATGTTTTGATGAGCCAGCCATGAAGGCCATGTTCA
ACATCACACTCATCTACCCCAACAACCTCATAGCTCTGTCTAATATGCTTCCCAAAGAGTCCAAGCCCTA
TCCGGAAGACCCTTCCTGCACCATGACTGAGTTCCACTCCACCCCTAAGATGTCCACATACCTGCTGGCC
TACATCGTGAGCGAGTTCAAAAATATAAGCTCCGTCTCAGCCAATGGTGTCCAGATTGGAATCTGGGCTC
GGCCCAGTGCCATTGATGAGGGCCAGGGTGATTACGCACTGAACGTTACAGGCCCCATCCTAAATTTCTT
TGCCCAACATTATAATACATCCTACCCTCTACCAAAGTCTGACCAGATTGCCCTGCCTGACTTCAACGCT
GGAGCCATGGAGAACTGGGGTCTGGTGACCTACCGTGAGAGCTCCCTGGTCTTTGACTCTCAGTCCTCCT
CCATTAGCAACAAGGAGCGGGTGGTCACTGTGATTGCTCACGAGCTGGCCCATCAGTGGTTTGGCAACCT
GGTGACTGTGGCTTGGTGGAATGATCTGTGGCTGAACGAGGGCTTTGCCTCCTACGTGGAATATCTGGGT
GCTGACTATGCAGAGCCTACCTGGAATCTGAAAGACCTCATGGTACTGAATGATGTGTACCGTGTGATGG
CCGTGGATGCCCTTGCCTCCTCCCACCCACTGTCCAGTCCTGCTGACGAGATCAAAACACCAGACCAGAT
CATGGAGCTGTTTGACAGCATCACCTACAGCAAGGGAGCCTCAGTCATCAGGATGCTGTCCAGTTTCCTG
ACAGAGGACCTGTTTAAGAAGGGCCTTTCATCTTATCTCCACACCTACCAGTACTCGAACACCGTTTATC
TGGACCTGTGGGAACACCTGCAAAAGGCCGTGAACCAACAGACAGCTGTCCAACCCCCGGCCACGGTGCG
CACTATCATGGACCGCTGGATTCTACAGATGGGCTTTCCCGTTATCACTGTGAACACCAATACAGGAGAA
ATCTCCCAGAAACACTTCCTCCTGGATTCCAAGTCCAACGTTACCCGCCCCTCCGAGTTTAATTACATCT
GGATCGCGCCCATTCCATTTCTCAAAAGTGGACAGGAGGATCACTACTGGCTGGATGTCGAGAAAAACCA
GAGTGCAAAGTTCCAGACATCCTCCAATGAATGGATCTTACTGAACATTAACGTAACCGGCTACTACCTG
GTTAACTATGATGAGAACAACTGGAAGAAGCTTCAGAATCAGCTGCAAACAGACCTTTCTGTTATCCCTG
TCATCAACCGAGCACAGATTATCCACGACTCCTTCAACCTGGCCAGTGCTAAAATGATACCCATCACCCT
GGCGCTGGACAACACCCTCTTCCTGGTCAAAGAGGCGGAGTACATGCCCTGGCAGGCTGCCCTGAGCAGC
CTCAACTACTTCACACTCATGTTCGACCGCTCGGAGGTCTACGGCCCCATGAAGAGGTATCTGAAGAAGC
AAGTTACGCCCCTCTTCTTCTACTTCCAAAATAGAACCAACAACTGGGTCAACCGTCCTCCAACGCTGAT
GGAGCAGTACAATGAAATTAACGCCATCAGCACCGCCTGTTCCAGTGGTCTCAAAGAGTGTAGGGACCTG
GTCGTTGAGCTCTATAGTCAGTGGATGAAAAACCCTAATAATAACACGATCCACCCCAACCTTCGGTCTA
CTGTCTACTGCAATGCCATTGCTTTCGGTGGCGAAGAAGAGTGGAACTTTGCTTGGGAACAGTTCCGGAA
TGCAACTCTGGTGAACGAAGCGGACAAACTCCGGTCAGCCTTGGCCTGTAGCAAAGATGTGTGGATTTTG
AACAGGTACCTGAGTTACACTCTGAACCCGGACTACATCCGGAAGCAGGACACCACCTCCACCATCATCA
GCATTGCCAGCAACGTGGCTGGGCACCCTCTGGTTTGGGACTTTGTCCGAAGCAACTGGAAGAAACTGTT
TGAGAATTACGGTGGAGGATCTTTCTCCTTTGCCAATCTCATCCAGGGAGTGACCCGGCGCTTCTCCTCT
GAGTTCGAGCTGCAGCAGCTGGAGCAGTTTAAAGCGGATAACTCAGCCACAGGCTTTGGCACCGGCACTC
GGGCTCTGGAGCAAGCCCTGGAGAAGACGAGAGCCAACATCGACTGGGTGAAGGAGAACAAAGATGCGGT
ATTCAAGTGGTTCACAGAGAACAGCAGTTAG

Translation (966 aa):
MAKGFYISKTLGILGILLGVAAVCTIIALSVVYAQEKNRNAENSATAPTLPGSTSATTATTTPAVDESKP
WNQYRLPKTLIPDSYRVILRPYLTPNNQGLYIFQGNSTVRFTCNQTTDVIIIHSKKLNYTLKGNHRVVLR
TLDGTPAPNIDKTELVERTEYLVVHLQGSLVEGRQYEMDSQFQGELADDLAGFYRSEYMEGDVKKVVATT
QMQAADARKSFPCFDEPAMKAMFNITLIYPNNLIALSNMLPKESKPYPEDPSCTMTEFHSTPKMSTYLLA
YIVSEFKNISSVSANGVQIGIWARPSAIDEGQGDYALNVTGPILNFFAQHYNTSYPLPKSDQIALPDFNA
GAMENWGLVTYRESSLVFDSQSSSISNKERVVTVIAHELAHQWFGNLVTVAWWNDLWLNEGFASYVEYLG
ADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSSPADEIKTPDQIMELFDSITYSKGASVIRMLSSFL
TEDLFKKGLSSYLHTYQYSNTVYLDLWEHLQKAVNQQTAVQPPATVRTIMDRWILQMGFPVITVNTNTGE
ISQKHFLLDSKSNVTRPSEFNYIWIAPIPFLKSGQEDHYWLDVEKNQSAKFQTSSNEWILLNINVTGYYL
VNYDENNWKKLQNQLQTDLSVIPVINRAQIIHDSFNLASAKMIPITLALDNTLFLVKEAEYMPWQAALSS
LNYFTLMFDRSEVYGPMKRYLKKQVTPLFFYFQNRTNNWVNRPPTLMEQYNEINAISTACSSGLKECRDL
VVELYSQWMKNPNNNTIHPNLRSTVYCNAIAFGGEEEWNFAWEQFRNATLVNEADKLRSALACSKDVWIL
NRYLSYTLNPDYIRKQDTTSTIISIASNVAGHPLVWDFVRSNWKKLFENYGGGSFSFANLIQGVTRRFSS
EFELQQLEQFKADNSATGFGTGTRALEQALEKTRANIDWVKENKDAVFKWFTENSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH