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Report for CCDS45330.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45330.2 Public Homo sapiens 15 CPEB1 24 110 108 CCDS HistoryNCBI Gene:64506Re-query CCDS DB by CCDS ID:45330.2Re-query CCDS DB by GeneID:64506See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 45330.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617462.4 ENSP00000477557.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617462.4Link to Ensembl Protein Viewer:ENSP00000477557.1Re-query CCDS DB by Nucleotide ID:ENST00000617462Re-query CCDS DB by Protein ID:ENSP00000477557
Original member Current member EBI ENST00000617522.4 ENSP00000481009.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617522.4Link to Ensembl Protein Viewer:ENSP00000481009.1Re-query CCDS DB by Nucleotide ID:ENST00000617522Re-query CCDS DB by Protein ID:ENSP00000481009
Original member Current member EBI ENST00000611163.4 ENSP00000483857.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611163.4Link to Ensembl Protein Viewer:ENSP00000483857.1Re-query CCDS DB by Nucleotide ID:ENST00000611163Re-query CCDS DB by Protein ID:ENSP00000483857
Original member Current member EBI ENST00000620182.4 ENSP00000484549.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620182.4Link to Ensembl Protein Viewer:ENSP00000484549.1Re-query CCDS DB by Nucleotide ID:ENST00000620182Re-query CCDS DB by Protein ID:ENSP00000484549
Original member Current member NCBI NM_001079534.2 NP_001073002.1 Accepted alive Link to Nucleotide Sequence:NM_001079534.2Link to Protein Sequence:NP_001073002.1Re-query CCDS DB by Nucleotide ID:NM_001079534Re-query CCDS DB by Protein ID:NP_001073002Link to BLAST:NP_001073002.1
Original member Current member NCBI NM_001079535.2 NP_001073003.1 Accepted alive Link to Nucleotide Sequence:NM_001079535.2Link to Protein Sequence:NP_001073003.1Re-query CCDS DB by Nucleotide ID:NM_001079535Re-query CCDS DB by Protein ID:NP_001073003Link to BLAST:NP_001073003.1
Original member Current member NCBI NM_001288819.2 NP_001275748.1 Accepted alive Link to Nucleotide Sequence:NM_001288819.2Link to Protein Sequence:NP_001275748.1Re-query CCDS DB by Nucleotide ID:NM_001288819Re-query CCDS DB by Protein ID:NP_001275748Link to BLAST:NP_001275748.1
Original member Current member NCBI NM_001365244.1 NP_001352173.1 Accepted alive Link to Nucleotide Sequence:NM_001365244.1Link to Protein Sequence:NP_001352173.1Re-query CCDS DB by Nucleotide ID:NM_001365244Re-query CCDS DB by Protein ID:NP_001352173Link to BLAST:NP_001352173.1
Original member Current member NCBI NM_001365245.1 NP_001352174.1 Accepted alive Link to Nucleotide Sequence:NM_001365245.1Link to Protein Sequence:NP_001352174.1Re-query CCDS DB by Nucleotide ID:NM_001365245Re-query CCDS DB by Protein ID:NP_001352174Link to BLAST:NP_001352174.1
Original member Current member NCBI NM_001365246.1 NP_001352175.1 Accepted alive Link to Nucleotide Sequence:NM_001365246.1Link to Protein Sequence:NP_001352175.1Re-query CCDS DB by Nucleotide ID:NM_001365246Re-query CCDS DB by Protein ID:NP_001352175Link to BLAST:NP_001352175.1
Original member Current member NCBI NM_001365247.1 NP_001352176.1 Accepted alive Link to Nucleotide Sequence:NM_001365247.1Link to Protein Sequence:NP_001352176.1Re-query CCDS DB by Nucleotide ID:NM_001365247Re-query CCDS DB by Protein ID:NP_001352176Link to BLAST:NP_001352176.1
Original member Current member NCBI NM_001365248.1 NP_001352177.1 Accepted alive Link to Nucleotide Sequence:NM_001365248.1Link to Protein Sequence:NP_001352177.1Re-query CCDS DB by Nucleotide ID:NM_001365248Re-query CCDS DB by Protein ID:NP_001352177Link to BLAST:NP_001352177.1
Original member Current member NCBI NM_001365249.1 NP_001352178.1 Accepted alive Link to Nucleotide Sequence:NM_001365249.1Link to Protein Sequence:NP_001352178.1Re-query CCDS DB by Nucleotide ID:NM_001365249Re-query CCDS DB by Protein ID:NP_001352178Link to BLAST:NP_001352178.1
Original member Current member NCBI NM_001387069.1 NP_001373998.1 Accepted alive Link to Nucleotide Sequence:NM_001387069.1Link to Protein Sequence:NP_001373998.1Re-query CCDS DB by Nucleotide ID:NM_001387069Re-query CCDS DB by Protein ID:NP_001373998Link to BLAST:NP_001373998.1
Original member Current member NCBI NM_001387070.1 NP_001373999.1 Accepted alive Link to Nucleotide Sequence:NM_001387070.1Link to Protein Sequence:NP_001373999.1Re-query CCDS DB by Nucleotide ID:NM_001387070Re-query CCDS DB by Protein ID:NP_001373999Link to BLAST:NP_001373999.1
Original member Current member NCBI NM_001387071.1 NP_001374000.1 Accepted alive Link to Nucleotide Sequence:NM_001387071.1Link to Protein Sequence:NP_001374000.1Re-query CCDS DB by Nucleotide ID:NM_001387071Re-query CCDS DB by Protein ID:NP_001374000Link to BLAST:NP_001374000.1
Original member Current member NCBI NM_001387072.1 NP_001374001.1 Accepted alive Link to Nucleotide Sequence:NM_001387072.1Link to Protein Sequence:NP_001374001.1Re-query CCDS DB by Nucleotide ID:NM_001387072Re-query CCDS DB by Protein ID:NP_001374001Link to BLAST:NP_001374001.1
Original member Current member NCBI NM_001387073.1 NP_001374002.1 Accepted alive Link to Nucleotide Sequence:NM_001387073.1Link to Protein Sequence:NP_001374002.1Re-query CCDS DB by Nucleotide ID:NM_001387073Re-query CCDS DB by Protein ID:NP_001374002Link to BLAST:NP_001374002.1
Original member Current member NCBI NM_001387074.1 NP_001374003.1 Accepted alive Link to Nucleotide Sequence:NM_001387074.1Link to Protein Sequence:NP_001374003.1Re-query CCDS DB by Nucleotide ID:NM_001387074Re-query CCDS DB by Protein ID:NP_001374003Link to BLAST:NP_001374003.1
Original member Current member NCBI NM_001387075.1 NP_001374004.1 Accepted alive Link to Nucleotide Sequence:NM_001387075.1Link to Protein Sequence:NP_001374004.1Re-query CCDS DB by Nucleotide ID:NM_001387075Re-query CCDS DB by Protein ID:NP_001374004Link to BLAST:NP_001374004.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073002.1 486 Q9BZB8-4 486 100% 0 0
NP_001073003.1 486 Q9BZB8-4 486 100% 0 0
NP_001275748.1 486 Q9BZB8-4 486 100% 0 0
NP_001352173.1 486 Q9BZB8-4 486 100% 0 0
NP_001352174.1 486 Q9BZB8-4 486 100% 0 0
NP_001352175.1 486 Q9BZB8-4 486 100% 0 0
NP_001352176.1 486 Q9BZB8-4 486 100% 0 0
NP_001352177.1 486 Q9BZB8-4 486 100% 0 0
NP_001352178.1 486 Q9BZB8-4 486 100% 0 0
NP_001373998.1 486 Q9BZB8-4 486 100% 0 0
NP_001373999.1 486 Q9BZB8-4 486 100% 0 0
NP_001374000.1 486 Q9BZB8-4 486 100% 0 0
NP_001374001.1 486 Q9BZB8-4 486 100% 0 0
NP_001374002.1 486 Q9BZB8-4 486 100% 0 0
NP_001374003.1 486 Q9BZB8-4 486 100% 0 0
NP_001374004.1 486 Q9BZB8-4 486 100% 0 0

Chromosomal Locations for CCDS 45330.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82544592 82544702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82546441 82546521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82547143 82547237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82549460 82549658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82552480 82552616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82553467 82553556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82553878 82553991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82555870 82556122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82557760 82557986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82571344 82571497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGCTTTTCCCAACCTCTGCGCAAGAATCTTCCCGTGGCCTCCCAGATGCAAATGACTTGTGCCTTGGCC
TGCAGTCCCTCAGTCTGACAGGCTGGGACCGACCCTGGAGCACCCAGGACTCAGATTCCTCAGCCCAGAG
CAGCACACACTCGGTACTGAGCATGCTCCATAACCCACTGGGAAATGTCCTAGGAAAACCCCCCTTGAGC
TTCCTGCCTCTGGATCCCCTTGGGTCTGACTTGGTGGACAAGTTTCCAGCACCCTCAGTTAGAGGATCAC
GCCTGGACACCCGGCCCATCCTGGACTCTCGATCTAGCAGCCCCTCTGACTCAGACACCAGTGGCTTCAG
CTCTGGATCAGATCATCTCTCAGATTTGATTTCAAGCCTTCGCATTTCTCCACCTCTGCCCTTCCTGTCT
CTGTCAGGGGGTGGTCCCAGAGACCCTTTAAAGATGGGGGTAGGGTCTCGGATGGACCAAGAGCAAGCTG
CTCTTGCTGCAGTCACTCCCTCCCCAACCAGTGCTTCAAAGAGATGGCCAGGAGCTTCTGTGTGGCCATC
CTGGGACCTCCTCGAAGCTCCCAAAGACCCCTTCAGCATAGAGAGAGAGGCCAGGCTGCACCGACAAGCT
GCAGCTGTGAATGAAGCCACCTGTACCTGGAGTGGCCAGCTTCCTCCCCGGAACTATAAGAACCCCATCT
ACTCTTGCAAGGTGTTTCTAGGAGGTGTTCCTTGGGATATTACAGAAGCTGGATTAGTTAACACCTTCCG
TGTTTTTGGCTCTTTGAGTGTGGAGTGGCCTGGTAAGGATGGCAAGCATCCCCGGTGTCCTCCCAAAGGG
TATGTGTATCTGGTCTTCGAACTAGAGAAGTCTGTCCGATCCTTGCTTCAGGCTTGCTCTCATGACCCGC
TGAGCCCAGATGGCCTGAGTGAATATTATTTCAAGATGTCCAGCCGAAGGATGCGCTGCAAGGAGGTGCA
GGTGATCCCCTGGGTATTAGCCGACAGTAACTTTGTCCGGAGCCCATCTCAGAGGCTTGACCCCAGCAGG
ACGGTGTTTGTCGGTGCTCTGCATGGAATGCTAAATGCTGAGGCCCTGGCAGCCATCTTGAACGACCTAT
TTGGTGGAGTGGTGTATGCCGGGATTGACACAGATAAGCACAAGTATCCCATTGGTTCTGGTCGTGTGAC
TTTCAATAACCAACGGAGTTACCTGAAAGCAGTCAGCGCTGCTTTTGTGGAGATCAAAACCACCAAGTTC
ACAAAGAAGGTTCAGATTGACCCCTACCTAGAAGATTCTCTGTGTCATATCTGCAGTTCTCAGCCTGGTC
CTTTCTTCTGTCGAGATCAGGTCTGCTTCAAATACTTCTGCCGGAGCTGCTGGCACTGGCGGCACAGCAT
GGAGGGCCTGCGCCACCACAGCCCCCTGATGCGGAACCAGAAGAACCGAGATTCCAGCTAG

Translation (486 aa):
MLFPTSAQESSRGLPDANDLCLGLQSLSLTGWDRPWSTQDSDSSAQSSTHSVLSMLHNPLGNVLGKPPLS
FLPLDPLGSDLVDKFPAPSVRGSRLDTRPILDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLS
LSGGGPRDPLKMGVGSRMDQEQAALAAVTPSPTSASKRWPGASVWPSWDLLEAPKDPFSIEREARLHRQA
AAVNEATCTWSGQLPPRNYKNPIYSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKG
YVYLVFELEKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSR
TVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVSAAFVEIKTTKF
TKKVQIDPYLEDSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGLRHHSPLMRNQKNRDSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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