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Report for CCDS35162.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35162.1 Public Homo sapiens 9 GPR107 24 110 108 CCDS HistoryNCBI Gene:57720Re-query CCDS DB by CCDS ID:35162.1Re-query CCDS DB by GeneID:57720See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35162.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347136.11 ENSP00000336988.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000347136.11Link to Ensembl Protein Viewer:ENSP00000336988.7Re-query CCDS DB by Nucleotide ID:ENST00000347136Re-query CCDS DB by Protein ID:ENSP00000336988
Original member Current member NCBI NM_020960.5 NP_066011.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020960.5Link to Protein Sequence:NP_066011.2Re-query CCDS DB by Nucleotide ID:NM_020960Re-query CCDS DB by Protein ID:NP_066011Link to BLAST:NP_066011.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066011.2 552 Q5VW38-2 552 100% 0 0

Chromosomal Locations for CCDS 35162.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 130053933 130054073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130075636 130075749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130076412 130076462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130077299 130077378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130079630 130079769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130083565 130083602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130086420 130086476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130090876 130090983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130092248 130092381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130099457 130099532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130100629 130100702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130101106 130101223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130104420 130104550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130107496 130107539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130124915 130124964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130127483 130127566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130128640 130128761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130135025 130135121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1659 nt):
ATGGCCGCTCTGGCGCCCGTCGGCTCCCCCGCCTCCCGCGGTCCTAGGCTGGCCGCGGGCCTCCGGCTGC
TCCCAATGCTGGGTTTGCTGCAGTTGCTGGCCGAGCCTGGCCTGGGCCGCGTCCATCACCTGGCACTCAA
GGATGATGTGAGGCATAAAGTTCATCTGAACACCTTTGGCTTCTTCAAGGATGGGTACATGGTGGTGAAT
GTCAGTAGCCTCTCACTGAATGAGCCTGAAGACAAGGATGTGACTATTGGATTTAGCCTAGACCGTACAA
AGAATGATGGCTTTTCTTCTTACCTGGATGAAGATGTGAATTACTGTATTTTAAAGAAACAGTCTGTCTC
TGTCACCCTTTTAATCCTAGACATCTCCAGAAGTGAGGTAAGAGTAAAGTCTCCACCAGAAGCTGGTACC
CAGTTACCAAAGATCATCTTCAGCAGGGATGAGAAAGTCCTTGGTCAGAGCCAGGAGCCTAATGTTAACC
CTGCTTCAGCAGGCAACCAGACCCAGAAGACACAAGATGGTGGAAAGTCTAAAAGAAGTACAGTGGATTC
AAAGGCCATGGGAGAGAAATCCTTTTCTGTTCATAATAATGGTGGGGCAGTGTCATTTCAGTTTTTCTTT
AACATCAGCACTGATGACCAAGAAGGCCTTTACAGTCTTTATTTTCATAAATGCCTTGGAAAAGAATTGC
CAAGTGACAAGTTTACATTCAGCCTTGATATTGAGATCACAGAGAAGAATCCTGACAGCTACCTCTCAGC
AGGAGAAATTCCTCTCCCCAAATTATACATCTCAATGGCCTTTTTCTTCTTTCTTTCTGGGACCATCTGG
ATTCATATCCTTCGAAAACGACGGAATGATGTATTTAAAATCCACTGGCTGATGGCGGCCCTTCCTTTCA
CCAAGTCTCTTTCCTTGGTGTTCCATGCAATTGACTACCACTACATCTCCTCCCAGGGCTTCCCTATCGA
AGGCTGGGCTGTTGTGTACTACATAACTCACCTTTTGAAAGGGGCGCTACTCTTCATCACCATTGCACTC
ATTGGCACTGGCTGGGCTTTCATTAAGCACATCCTTTCTGATAAAGACAAAAAGATCTTCATGATTGTCA
TTCCACTCCAGGTCCTGGCAAATGTAGCCTACATCATCATAGAGTCCACCGAGGAGGGCACGACTGAATA
TGGCTTGTGGAAGGACTCTCTATTTCTGGTCGACCTGTTGTGTTGTGGTGCCATCCTCTTCCCAGTGGTG
TGGTCAATCAGACATTTACAAGAAGCATCAGCAACAGATGGAAAAGCTGCTATTAACTTAGCAAAGCTGA
AACTTTTCAGACATTATTACGTCTTGATTGTGTGTTACATATACTTCACTAGGATCATTGCATTTCTCCT
CAAACTCGCTGTTCCATTCCAGTGGAAGTGGCTCTACCAGCTCCTGGATGAAACGGCCACACTGGTCTTC
TTTGTTCTAACGGGGTATAAATTCCGTCCGGCTTCAGATAACCCCTACCTACAACTTTCTCAGGAAGAAG
AAGACTTGGAAATGGAGTCCGTTGTGACAACATCTGGGGTGATGGAAAGTATGAAGAAAGTCAAGAAGGT
GACCAACGGCTCCGTGGAGCCCCAGGGCGAGTGGGAAGGCGCCGTGTGA

Translation (552 aa):
MAALAPVGSPASRGPRLAAGLRLLPMLGLLQLLAEPGLGRVHHLALKDDVRHKVHLNTFGFFKDGYMVVN
VSSLSLNEPEDKDVTIGFSLDRTKNDGFSSYLDEDVNYCILKKQSVSVTLLILDISRSEVRVKSPPEAGT
QLPKIIFSRDEKVLGQSQEPNVNPASAGNQTQKTQDGGKSKRSTVDSKAMGEKSFSVHNNGGAVSFQFFF
NISTDDQEGLYSLYFHKCLGKELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIW
IHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIAL
IGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVV
WSIRHLQEASATDGKAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVF
FVLTGYKFRPASDNPYLQLSQEEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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