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Report for CCDS81812.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81812.1 Public Homo sapiens 14 RAB15 24 110 108 CCDS HistoryNCBI Gene:376267Re-query CCDS DB by CCDS ID:81812.1Re-query CCDS DB by GeneID:376267See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81812.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000554593.2 ENSP00000452195.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554593.2Link to Ensembl Protein Viewer:ENSP00000452195.2Re-query CCDS DB by Nucleotide ID:ENST00000554593Re-query CCDS DB by Protein ID:ENSP00000452195
Original member Current member NCBI NM_001330182.2 NP_001317111.1 Accepted alive Link to Nucleotide Sequence:NM_001330182.2Link to Protein Sequence:NP_001317111.1Re-query CCDS DB by Nucleotide ID:NM_001330182Re-query CCDS DB by Protein ID:NP_001317111Link to BLAST:NP_001317111.1

Chromosomal Locations for CCDS 81812.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 64948354 64948512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64948668 64948733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64950325 64950414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64951074 64951151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64951603 64951663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 64952511 64952557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGAAGACCATAGAGGTAGACGGCATCAAAGTGCGGATACAGATCTGGGACACTGCAGGGCAGGAGAGAT
ACCAGACCATCACAAAGCAGTACTATCGGCGGGCCCAGGGGATATTTTTGGTCTATGACATTAGCAGCGA
GCGCTCTTACCAGCACATCATGAAGTGGGTCAGTGACGTGGATGAGTACGCACCAGAAGGCGTCCAGAAG
ATCCTTATTGGGAATAAGGCTGATGAGGAGCAGAAACGGCAGGTGGGAAGAGAGCAAGGGCAGCAGCTGG
CGAAGGAGTATGGCATGGACTTCTATGAAACAAGTGCCTGCACCAACCTCAACATTAAAGAGTCATTCAC
GCGTCTGACAGAGCTGGTGCTGCAGGCCCATAGGAAGGAGCTGGAAGGCCTCCGGATGCGTGCCAGCAAT
GAGTTGGCACTGGCAGAGCTGGAGGAGGAGGAGGGCAAACCCGAGGGCCCAGCGAACTCTTCGAAAACCT
GCTGGTGCTGA

Translation (166 aa):
MKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQK
ILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELEGLRMRASN
ELALAELEEEEGKPEGPANSSKTCWC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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