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Report for CCDS74131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74131.1 Public Homo sapiens 17 TEX2 24 110 108 CCDS HistoryNCBI Gene:55852Re-query CCDS DB by CCDS ID:74131.1Re-query CCDS DB by GeneID:55852See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000583097.5 ENSP00000462665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000583097.5Link to Ensembl Protein Viewer:ENSP00000462665.1Re-query CCDS DB by Nucleotide ID:ENST00000583097Re-query CCDS DB by Protein ID:ENSP00000462665
Original member Current member EBI ENST00000584379.6 ENSP00000463001.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000584379.6Link to Ensembl Protein Viewer:ENSP00000463001.1Re-query CCDS DB by Nucleotide ID:ENST00000584379Re-query CCDS DB by Protein ID:ENSP00000463001
Original member Current member NCBI NM_001288732.2 NP_001275661.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001288732.2Link to Protein Sequence:NP_001275661.1Re-query CCDS DB by Nucleotide ID:NM_001288732Re-query CCDS DB by Protein ID:NP_001275661Link to BLAST:NP_001275661.1
Original member Current member NCBI NM_001288733.2 NP_001275662.1 Accepted alive Link to Nucleotide Sequence:NM_001288733.2Link to Protein Sequence:NP_001275662.1Re-query CCDS DB by Nucleotide ID:NM_001288733Re-query CCDS DB by Protein ID:NP_001275662Link to BLAST:NP_001275662.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001275661.1 1127 Q8IWB9-1 1127 100% 0 0
NP_001275662.1 1127 Q8IWB9-1 1127 100% 0 0

Chromosomal Locations for CCDS 74131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 64148969 64149091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64150841 64150961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64152945 64153154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64154842 64154967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64160801 64160933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64171100 64171199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64177325 64177471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64188168 64188415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64193559 64193889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64194895 64195095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64212574 64214217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3384 nt):
ATGACAAGTCTGTATGGTCGCCATGCCGAGAAAACCACTGACATGCCAAAACCATCAGCCCCTAAAGTGC
ACGTGCAGAGGTCCGTGTCCCGAGATACCATCGCCATTCACTTCTCGGCATCCGGCGAGGAGGAGGAGGA
AGAGGAGGAGGAGTTCAGGGAGTACTTTGAGGAGGGGCTGGATGACCAAAGCATTGTAACAGGGCTGGAA
GCCAAGGAAGACCTCTATCTTGAACCCCAAGTTGGCCATGACCCCGCCGGCCCTGCTGCCTCGCCTGTCC
TGGCAGATGGACTGTCCGTGTCCCAGGCCCCTGCCATTTTGCCCGTCTCCAAGAACACTGTAAAGCTGTT
GGAGTCCCCTGTTCCAGCAGCACAAGTATTAAGTACAGTGCCATTGGCTGTGTCCCCAGGGTCGTCTTCG
TCGGGGCCCTTAGCTAGCTCTCCCAGTGTGTCATCCCTTTCTGAGCAGAAAACCAGTTCTTCCTCCCCAT
TGTCCTCTCCTTCTAAGTCTCCCATCCTCTCATCCAGTGCCTCAACCTCCACCCTTTCCAGTGCAAAACC
CTTCATGAGCCTTGTGAAGTCCCTGTCGACCGAGGTGGAGCCAAAAGAATCCCCACACCCCGCAAGGCAC
AGGCACTTGATGAAGACATTAGTCAAGTCTCTGTCCACGGACACTTCCCGGCAGGAGTCGGATACAGTGT
CCTATAAGCCACCTGATTCCAAACTGAACTTACACCTGTTCAAGCAGTTCACACAGCCCCGAAACACAGG
TGGAGATTCCAAAACTGCACCTTCTTCCCCACTGACTTCTCCCTCTGATACTCGTTCCTTTTTTAAAGTG
CCCGAAATGGAGGCTAAAATTGAAGATACTAAACGACGCCTTTCAGAAGTCATCTATGAGCCTTTTCAGC
TCCTTAGTAAAATTATAGGGGAAGAAAGTGGCAGCCATAGGCCCAAAGCCTTATCTTCAAGTGCTTCAGA
ACTCTCCAATCTGTCCAGCTTGAATGGGCACTTGGAAAGCAATAACAACTACAGCATCAAGGAGGAGGAG
TGTGATTCTGAGGGGGATGGCTACGGAAGTGATTCCAACATCCCCAGAAGTGACCACCCAAAGTCCACTG
GTGAGCCCACAAGAGAGATAGAACTGAAAAGTTCCCAGGGGAGCAGTCTGAAGGATTTAGGCCTGAAGAC
AAGTTCTCTAGTTCTGGAGAAATGTTCTTTGTCTGCCTTAGTGAGCAAAGAAGATGAAGAGTTTTGTGAA
CTGTACACTGAGGACTTCGATTTGGAAACGGAGGGGGAGAGTAAAGTTGATAAGCTCTCAGATATTCCTC
TCAAGCCAGAGGTGCTCGCGGAAGATGGTGTGGTCCTTGACAGTGAGGACGAGGTGGACTCGGCCGTGCA
GCACCCGGAATTGCCAGTGAAGACGTTGGGCTTCTTTATAATGTGTGTCTATGTGTACCTCATCCTCCCC
CTCCCCCACTATGTGAGTGGACTCTTTCTGGGAATTGGCCTTGGATTCATGACTGCAGTTTGCGTGATTT
GGTTTTTTACACCACCAAGTGCTCATAAATATCACAAGTTACACAAAAATCTGCGACACTGGAACACAAG
ATCTCTGGATATCAAAGAACCTGAAATACTGAAGGGATGGATGAATGAGATTTACAACTATGATCCAGAA
ACCTACCATGCGACTTTGACACATTCAGTCTTTGTTCGACTTGAGGGTGGAACCTTAAGACTTTCAAAGC
CCAATAAAAATATATCCAGGAGGGCCAGCTACAATGAACCCAAGCCAGAGGTCACCTACATCAGCCAGAA
AATCTATGACCTCTCAGACAGCAAGATTTATCTTGTACCTAAAACTTTGGCTCGAAAGCGAATCTGGAAT
AAAAAGTACCCCATTTGTATCGAGCTTGGTCAGCAAGATGACTTTATGTCTAAAGCTCAGACTGATAAGG
AGACTTCAGAAGAGAAGCCGCCAGCTGAGGGAAGTGAGGACCCTAAGAAGCCACCCCGCCCTCAGGAGGG
AACAAGATCTAGCCAGCGAGATCAGATACTCTATCTCTTTGGGAGAACTGGCCGAGAAAAAGAGGAATGG
TTTAGGAGATTTATTCTGGCATCTAAGCTAAAGTCGGAAATCAAGAAGTCATCGGGTGTCTCTGGAGGTA
AACCAGGGCTTTTGCCTGCACACAGCAGACACAACAGTCCGTCCGGGCACCTGACCCACAGCCGCAGCAG
CAGCAAAGGCAGTGTGGAGGAGATCATGTCACAGCCAAAGCAGAAGGAGCTGGCAGGCAGCGTGCGGCAG
AAGATGCTTCTCGACTACAGCGTGTACATGGGCAGGTGTGTCCCCCAGGAAAGCCGAAGCCCCCAGAGGA
GCCCCCTGCAGAGTGCGGAGAGCAGCCCCACAGCTGGGAAGAAGTTGCCAGAGGTTCCACCCTCTGAGGA
GGAAGAACAGGAAGCCTGGGTGAATGCCTTGCTTGGAAGAATATTTTGGGACTTCTTAGGAGAGAAATAC
TGGTCTGATCTGGTGTCTAAGAAGATCCAAATGAAACTCAGCAAAATAAAGCTCCCCTACTTTATGAATG
AGCTCACTCTGACGGAACTTGACATGGGCGTGGCTGTGCCAAAAATCCTCCAGGCCTTCAAGCCTTACGT
TGATCACCAAGGACTCTGGATTGATTTGGAAATGTCCTACAATGGGTCCTTTCTGATGACTCTCGAGACC
AAAATGAATTTGACCAAACTAGGTAAAGAGCCTCTTGTTGAAGCCCTGAAGGTTGGAGAAATTGGCAAAG
AAGGTTGCAGGCCCCGGGCATTCTGTCTGGCGGACAGCGATGAGGAATCCTCCAGCGCTGGCTCCTCCGA
GGAAGACGATGCCCCAGAGCCCAGCGGGGGAGACAAACAGCTCCTCCCAGGGGCTGAAGGGTACGTTGGA
GGTCATCGAACAAGTAAGATTATGAGGTTTGTTGATAAAATTACCAAGTCAAAATATTTCCAAAAAGCAA
CAGAGACAGAGTTTATTAAAAAGAAGATCGAAGAAGTCTCCAACACACCCCTGCTGCTCACTGTTGAAGT
ACAAGAATGTAGAGGAACCTTGGCGGTCAACATTCCACCACCCCCGACTGACCGAGTATGGTATGGTTTC
CGAAAGCCACCACATGTGGAGCTGAAAGCTCGGCCAAAACTTGGAGAGAGAGAAGTGACTTTAGTTCATG
TGACAGACTGGATAGAGAAGAAACTGGAGCAAGAGTTTCAGAAAGTTTTTGTCATGCCAAACATGGATGA
TGTTTATATCACTATAATGCACTCAGCCATGGACCCTCGCTCTACTTCCTGCCTCCTGAAAGACCCACCT
GTGGAGGCTGCTGATCAGCCATGA

Translation (1127 aa):
MTSLYGRHAEKTTDMPKPSAPKVHVQRSVSRDTIAIHFSASGEEEEEEEEEFREYFEEGLDDQSIVTGLE
AKEDLYLEPQVGHDPAGPAASPVLADGLSVSQAPAILPVSKNTVKLLESPVPAAQVLSTVPLAVSPGSSS
SGPLASSPSVSSLSEQKTSSSSPLSSPSKSPILSSSASTSTLSSAKPFMSLVKSLSTEVEPKESPHPARH
RHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKV
PEMEAKIEDTKRRLSEVIYEPFQLLSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEE
CDSEGDGYGSDSNIPRSDHPKSTGEPTREIELKSSQGSSLKDLGLKTSSLVLEKCSLSALVSKEDEEFCE
LYTEDFDLETEGESKVDKLSDIPLKPEVLAEDGVVLDSEDEVDSAVQHPELPVKTLGFFIMCVYVYLILP
LPHYVSGLFLGIGLGFMTAVCVIWFFTPPSAHKYHKLHKNLRHWNTRSLDIKEPEILKGWMNEIYNYDPE
TYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNEPKPEVTYISQKIYDLSDSKIYLVPKTLARKRIWN
KKYPICIELGQQDDFMSKAQTDKETSEEKPPAEGSEDPKKPPRPQEGTRSSQRDQILYLFGRTGREKEEW
FRRFILASKLKSEIKKSSGVSGGKPGLLPAHSRHNSPSGHLTHSRSSSKGSVEEIMSQPKQKELAGSVRQ
KMLLDYSVYMGRCVPQESRSPQRSPLQSAESSPTAGKKLPEVPPSEEEEQEAWVNALLGRIFWDFLGEKY
WSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLET
KMNLTKLGKEPLVEALKVGEIGKEGCRPRAFCLADSDEESSSAGSSEEDDAPEPSGGDKQLLPGAEGYVG
GHRTSKIMRFVDKITKSKYFQKATETEFIKKKIEEVSNTPLLLTVEVQECRGTLAVNIPPPPTDRVWYGF
RKPPHVELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYITIMHSAMDPRSTSCLLKDPP
VEAADQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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